Target capture data resolve recalcitrant relationships in the coffee family (Rubioideae, Rubiaceae) [PDF]
Frontiers in Plant Science, 2022 Subfamily Rubioideae is the largest of the main lineages in the coffee family (Rubiaceae), with over 8,000 species and 29 tribes. Phylogenetic relationships among tribes and other major clades within this group of plants are still only partly resolved ...
Catarina Rydin +2 more
exaly +4 more sources
Plastid phylogenomics and cytonuclear discordance in Rubioideae, Rubiaceae [PDF]
PLoS ONEIn this study of evolutionary relationships in the subfamily Rubioideae (Rubiaceae), we take advantage of the off-target proportion of reads generated via previous target capture sequencing projects based on nuclear genomic data to build a plastome ...
Catarina Rydin +2 more
exaly +3 more sources
The complete chloroplast genome of Foonchewia coriacea (Rubioideae: Rubiaceae): a monotypic species endemic to Guangdong, China [PDF]
Mitochondrial DNA. Part B. Resources, 2021 Foonchewia coriacea, a monotypic genus of the Rubiaceae, is endemic to China. Its complete chloroplast genome was determined to be 153,114 bp in length and the GC content was 37.90%.
Ying Zhang +3 more
doaj +2 more sources
A target enrichment probe set for resolving phylogenetic relationships in the coffee family, Rubiaceae [PDF]
Applications in Plant Sciences, 2023 Premise Rubiaceae is among the most species‐rich plant families, as well as one of the most morphologically and geographically diverse. Currently available phylogenies have mostly relied on few genomic and plastid loci, as opposed to large‐scale genomic ...
Laymon D. Ball +3 more
doaj +2 more sources
The complete chloroplast genome and phylogenetic analysis of Ophiorrhiza guizhouensis (Rubiaceae), a folk medicinal plant from the Wuling Mountain region [PDF]
Mitochondrial DNA. Part B. ResourcesOphiorrhiza guizhouensis has not had its complete chloroplast genome reported, which limits our understanding of its genetics and evolution. In this study, we assembled and annotated its chloroplast genome, revealing a circular structure with 80 protein ...
Gongping Kang +2 more
doaj +2 more sources
Complete chloroplast genome and phylogenetic analysis of Richardia brasiliensis (Rubiaceae, Rubioideae, Spermacoceae) [PDF]
Mitochondrial DNA. Part B. ResourcesWe determined the chloroplast genome of Richardia brasiliensis. The genome was 154,573 bp with a typical quadripartite structure: a large single-copy region (84,388 bp), a small single-copy region (17,411 bp), and two inverted repeat regions (26,387 bp ...
Eun Su Kang +3 more
doaj +2 more sources
Molecular and morphological evidence supports transferring Sacosperma (Rubiaceae, Rubioideae) from Spermacoceae to Knoxieae [PDF]
PhytoKeysThe genus Sacosperma (Rubiaceae) comprises two species of lianas occurring in tropical African rainforests. It is currently placed in tribe Spermacoceae, but morphological evidence suggests that placement in tribe Knoxieae might be more appropriate. This
Brecht Verstraete +7 more
doaj +4 more sources
Differentiation of Hedyotis diffusa and Common Adulterants Based on Chloroplast Genome Sequencing and DNA Barcoding Markers [PDF]
Plants, 2021 Chinese herbal tea, also known as Liang Cha or cooling beverage, is popular in South China. It is regarded as a quick-fix remedy to relieve minor health problems. Hedyotis diffusa Willd.
Mavis Hong-Yu Yik +5 more
doaj +2 more sources
Ophiorrhiza monsvictoriae (Rubiaceae, Rubioideae), a new species from Myanmar [PDF]
PhytoKeys, 2020 A new species, Ophiorrhiza monsvictoriae S.S.Zhou & L.D.Duan, discovered at Natma Taung (Mt.Victoria) National Park, Chin State, Myanmar, is described and illustrated. The new species is morphologically similar to O. dulongensis, but differs from
Shi-Shun Zhou +4 more
doaj +4 more sources
The complete chloroplast genome of alien invasive species, Diodia virginiana L. (rubiaceae), in China [PDF]
Mitochondrial DNA. Part B. Resources, 2019 The first complete chloroplast genome sequences of new intercepted alien weeds in China, Diodia, were reported in this study. The D. virginiana plastome was 154,387 bp long, with the large single copy (LSC) region of 83,625 bp, the small single copy (SSC)
Han Xu
doaj +2 more sources