Results 91 to 100 of about 235,564 (296)

Emerging experimental and computational methods for studying redox‐regulated structural transitions

open access: yesFEBS Letters, EarlyView.
Redox reactions can reshape proteins and alter how they behave in cells, with important consequences for health and disease. This review explores emerging experimental and computational approaches for discovering these redox‐sensitive protein switches, revealing their structural effects, and predicting their behavior, opening new opportunities to ...
Tasneem Rass   +2 more
wiley   +1 more source

Symmetry breaking for maximum satisfiability

open access: yes, 2008
Symmetries are intrinsic to many combinatorial problems including Boolean Satisfiability (SAT) and Constraint Programming (CP). In SAT, the identification of symmetry breaking predicates (SBPs) is a well-known, often effective, technique for solving hard
Marques-Silva, Joao   +2 more
core   +2 more sources

Functional comparison of EncB and EncC cargo proteins in iron storage within the Myxococcus xanthus encapsulin

open access: yesFEBS Letters, EarlyView.
Encapsulins are protein nanocompartments that play an important role in iron storage. In the Myxococcus xanthus encapsulin system, two cargo proteins called EncB and EncC contribute to iron mineralization. Here, we show that EncB and EncC generate iron‐containing minerals with distinct chemical compositions, suggesting that the composition of stored ...
Harry B. McDowell   +2 more
wiley   +1 more source

New Algorithms for #2-SAT and #3-SAT

open access: yesProceedings of the Thirty-Fourth International Joint Conference on Artificial Intelligence
The #2-SAT and #3-SAT problems involve counting the number of satisfying assignments (also called models) for instances of 2-SAT and 3-SAT, respectively. In 2010, Zhou et al. (https://doi.org/10.1609/aaai.v24i1.7537) proposed an O*(1.1892^m)-time algorithm for #2-SAT and an efficient approach for #3-SAT, where m denotes the number of clauses.
Junqiang Peng 0001   +2 more
openaire   +3 more sources

Structural and biochemical analysis of a B12 superbinder

open access: yesFEBS Letters, EarlyView.
BtuG proteins are vitamin B12 scavengers in Bacteroides thetaiotaomicron, a dominant human gut bacterium. We present crystal structures of three BtuG homologs bound to cobalamin and its precursor cobinamide, revealing picomolar binding affinities, among the highest known for any natural protein.
Jose M. Martinez Felices   +3 more
wiley   +1 more source

On the Glucose SAT Solver

open access: yesInternational Journal on Artificial Intelligence Tools, 2018
The set of novelties introduced with the SAT solver Glucose is now considered as a standard for practical SAT solving. In this paper, we review the different strategies and technologies added in Glucose over the years. We detail each technique and discuss its impact on the final performances reached by Glucose.
Audemard, Gilles, Simon, Laurent
openaire   +3 more sources

Structures of mycobacterial 3‐methylcrotonyl‐CoA carboxylase reveal carrier‐domain translocation between catalytic sites

open access: yesFEBS Letters, EarlyView.
Mycobacterial 3‐methylcrotonyl‐CoA carboxylase uses a mobile biotin‐carrying domain to shuttle a carboxyl group between two catalytic sites, enabling carboxylation of 3‐methylcrotonyl‐CoA during leucine breakdown. Cryo‐electron microscopy captures the carrier at both sites and reveals an inward loop movement that may prevent futile rebinding to the ...
Ajit Yadav   +2 more
wiley   +1 more source

Seroprevalence studies of human brucellosis in pyrexia of unknown origin (PUO) patients by various diagnostic modalities

open access: yesJournal of Family Medicine and Primary Care
Background: Brucellosis is a re-emerging zoonosis with global distribution. In India, it remains common but often neglected. In Rajasthan, where agriculture is prevalent, frequent contact with infected animals such as goats, sheep, and cattle leads to ...
Usha Verma, Prabhu Prakash
doaj   +1 more source

From junk to function — How weak selection in eukaryotes builds new parts and drives genomic complexity

open access: yesFEBS Letters, EarlyView.
How do genomes gain new functional parts? In eukaryotes, which tend to evolve under weak selection, much of the genome is junk. Palazzo and Qiu borrow the logic of Markov chains to show how non‐functional DNA becomes functional through the appearance of intermediate states, which arise due to epistasis, buffering, and biochemical messiness, allowing ...
Alexander F. Palazzo, Yi Qiu
wiley   +1 more source

Steroids and/or Cytotoxic Agents Should Be Used Early in the Management of Patients with IPF -- The Pro Argument

open access: yesCanadian Respiratory Journal, 2004
Idiopathic interstitial pneumonias comprise a heterogenous group of acute and chronic respiratory conditions. Katzenstein and Myers (1) classified these disorders according to several pathologically distinct categories: usual interstitial pneumonitis
Sat Sharma
doaj   +1 more source

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