Results 61 to 70 of about 259,819 (301)

Multiple Locus Variable-Number Tandem-Repeat and Single-Nucleotide Polymorphism-Based Brucella Typing Reveals Multiple Lineages in Brucella melitensis Currently Endemic in China

Frontiers in Veterinary Science, 2017
Brucellosis is a worldwide zoonotic disease caused by Brucella spp. In China, brucellosis is recognized as a reemerging disease mainly caused by Brucella melitensis specie. To better understand the currently endemic B.
Mingjun Sun, Zhigang Jing, Dongdong Di, Hao Yan, Zhicheng Zhang, Quangang Xu, Xiyue Zhang, Xun Wang, Bo Ni, Xiangxiang Sun, Chengxu Yan, Zhen Yang, Lili Tian, Jinping Li, Weixing Fan   +14 more
doaj   +1 more source

Evaluating the Utility of Paired Tumor and Germline Targeted DNA Sequencing for Pediatric Oncology Patients: A Single Institution Report

Pediatric Blood &Cancer, EarlyView.
ABSTRACT Objective To evaluate the diagnostic yield and utility of universal paired tumor–normal multigene panel sequencing in newly diagnosed pediatric solid and central nervous system (CNS) tumor patients and to compare the detection of germline pathogenic/likely pathogenic variants (PV/LPVs) against established clinical referral criteria for cancer ...
Natalie Waligorski, Rebecca Ronsley, Shannon M. Stasi, Jeffrey Stevens, Erin R. Rudzinski, Christina M. Lockwood, Sarah E. S. Leary, Bonnie L. Cole, Michelle A. Ting, Vera Paulson   +9 more
wiley   +1 more source

MultiPSQ: a software solution for the analysis of diagnostic n-plexed pyrosequencing reactions. [PDF]

PLoS ONE, 2013
BACKGROUND: Pyrosequencing can be applied for Single-Nucleotide-Polymorphism (SNP)-based pathogen typing or for providing sequence information of short DNA stretches.
Piotr Wojtek Dabrowski, Kati Schröder, Andreas Nitsche   +2 more
doaj   +1 more source

Leishmania donovani populations in Eastern Sudan: temporal structuring and a link between human and canine transmission. [PDF]

, 2014
BACKGROUND: Visceral leishmaniasis (VL), caused by the members of the Leishmania donovani complex, has been responsible for devastating VL epidemics in the Sudan.
Baleela, Rania, Fitzpatrick, Sinead, Kuhls, Katrin, Llewellyn, Martin S, Mauricio, Isabel L, Miles, Michael A, Schönian, Gabriele   +6 more
core   +3 more sources

Distribution of lag-1 Alleles, ORF7, and ORF8 Genes of Lipopolysaccharide and Sequence-Based Types Among Legionella pneumophila Serogroup 1 Isolates in Japan and China

Frontiers in Cellular and Infection Microbiology, 2019
Approximately 85% of cases of Legionnaires' disease are caused by Legionella pneumophila serogroup 1. In this study, we analyzed the distribution of lag-1 alleles, ORF 7 and ORF 8 genes of lipopolysaccharide (LPS) and sequence-based types of 616 L ...
Luxi Jiang, Luxi Jiang, Junko Amemura-Maekawa, Hongyu Ren, Yinan Li, Miho Sakata, Haijian Zhou, Haijian Zhou, Miyo Murai, Bin Chang, Makoto Ohnishi, Tian Qin, Tian Qin   +12 more
doaj   +1 more source

First multi-locus sequence typing scheme for Arcobacter spp. [PDF]

, 2009
Background: Arcobacter spp. are a common contaminant of food and water, and some species, primarily A. butzleri and A. cryaerophilus, have been isolated increasingly from human diarrheal stool samples.
Miller, William G, Wesley, Irene V, On, Stephen LW, Houf, Kurt, Megraud, Francis, Wang, Guilin, Yee, Emma, Srijan, Apichai, Mason, Carl J   +8 more
core   +3 more sources

Sequence-Based Typing of Mycoplasma genitalium Reveals Sexual Transmission [PDF]

Journal of Clinical Microbiology, 2006
ABSTRACT Mycoplasma genitalium causes male nonchlamydial, nongonococcal urethritis and is associated with cervicitis and pelvic inflammatory disease in women. Epidemiological studies indicate that M.
Sofie Vetli, Hjorth, Eva, Björnelius, Peter, Lidbrink, Lars, Falk, Birthe, Dohn, Lene, Berthelsen, Liang, Ma, David H, Martin, Jørgen Skov, Jensen   +8 more
openaire   +2 more sources

Two Faces of NOTCH1 in Childhood Lymphoblastic T‐Cell Neoplasia: Prognostic Divergence of Mutational and Structural Aberrations

Pediatric Blood &Cancer, EarlyView.
ABSTRACT In pediatric patients, T‐cell lymphoblastic lymphoma (T‐LBL) survival exceeds 80%. Relapse remains associated with limited curative options. Frontline treatment is largely extrapolated from T‐cell acute lymphoblastic leukemia (T‐ALL) treatment, reflecting the ongoing debate, whether both entities represent distinct diseases or variants within ...
Marie C. Heider, Amelie Alfert, Marc Hotfilder, Birgit Burkardt, Marcel te Vrugt   +4 more
wiley   +1 more source

Comparing Multiple Locus Variable-Number Tandem Repeat Analyses with Whole-Genome Sequencing as Typing Method for Salmonella Enteritidis Surveillance in The Netherlands, January 2019 to March 2020

Microbiology Spectrum, 2022
In the Netherlands, whole-genome sequencing (WGS) was implemented as routine typing tool for Salmonella Enteritidis isolates in 2019. Multiple locus variable-number tandem repeat analyses (MLVA) was performed in parallel.
Roan Pijnacker, Maaike van den Beld, Kim van der Zwaluw, Anjo Verbruggen, Claudia Coipan, Alejandra Hernandez Segura, Lapo Mughini-Gras, Eelco Franz, Thijs Bosch   +8 more
doaj   +1 more source

Correction: Sequence-Based Prediction of Type III Secreted Proteins

PLoS Pathogens, 2009
The affiliation for the eighth author, Hans-Werner Mewes, is missing an institution. This author should also be affiliated with affiliation #1: Technische Universitat Munchen, Department of Genome Oriented Bioinformatics, Wissenschaftszentrum Weihenstephan, Freising, Germany.
Roland Arnold, Stefan Brandmaier, Frederick Kleine, Patrick Tischler, Eva Heinz, Sebastian Behrens, Antti Niinikoski, Hans-Werner Mewes, Matthias Horn, Thomas Rattei   +9 more
openaire   +2 more sources