Results 241 to 250 of about 1,311,103 (281)

Multiple Sequence Alignment

2003
Publisher Summary This chapter discusses various aspects of multiple sequence alignment. Dynamic programming can be generalized to more than two sequences where one finds the multiple alignments with the best score according to the scoring scheme. Gaps are scored according to their length and the number of sequences that they occur in and the method ...
D G, Higgins, W R, Taylor
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A step towards sequence-to-sequence alignment

Proceedings IEEE Conference on Computer Vision and Pattern Recognition. CVPR 2000 (Cat. No.PR00662), 2002
The paper presents an approach for establishing correspondences in time and in space between two different video sequences of the same dynamic scene, recorded by stationary uncalibrated video cameras. The method simultaneously estimates both spatial alignment as well as temporal synchronization (temporal alignment) between the two sequences, using all ...
Yaron Caspi, Michal Irani
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On global sequence alignment

Bioinformatics, 1994
We present a dynamic programming algorithm for computing a best global alignment of two sequences. The proposed algorithm is robust in identifying any of several global relationships between two sequences. The algorithm delivers a best alignment of two sequences in linear space and quadratic time.
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Aligning Non-Overlapping Sequences

International Journal of Computer Vision, 2002
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Yaron Caspi, Michal Irani
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Constructing Aligned Sequence Blocks

Journal of Computational Biology, 1994
This paper presents an efficient method for constructing aligned blocks (i.e., gap-free multiple alignments) from a set of pairwise alignments. The method is more sensitive than some earlier block-constructing methods for detecting conserved sequence regions.
Webb Miller, Mark Boguski, Balaji Raghavachari, Zheng Zhang 0004, Ross C. Hardison   +4 more
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Aligning Sequences to Structures

2007
Most newly sequenced proteins are likely to adopt a similar structure to one which has already been experimentally determined. For this reason, the most successful approaches to protein structure prediction have been template-based methods. Such prediction methods attempt to identify and model the folds of unknown structures by aligning the target ...
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Sequence Alignment with Tandem Duplication

Journal of Computational Biology, 1997
Algorithm development for comparing and aligning biological sequences has, until recently, been based on the SI model of mutational events which assumes that modification of sequences proceeds through any of the operations of substitution, insertion or deletion (the latter two collectively termed indels). While this model has worked fairly well, it has
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Parametric Sequence Alignment with Constraints

Constraints, 2001
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
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Sequence Alignment

2022
This chapter focuses on comparing sequences using alignment. Sequence alignment is the operation that consists of matching two or more sequences, in order to highlight their similarity, whether it is local or global. If the alignment is given, then computing a score is a relatively simple task.
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Alignment of base sequences

Nature, 1984
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