Results 51 to 60 of about 8,102,704 (303)

S-conLSH: alignment-free gapped mapping of noisy long reads

open access: yesBMC Bioinformatics, 2021
Background The advancement of SMRT technology has unfolded new opportunities of genome analysis with its longer read length and low GC bias. Alignment of the reads to their appropriate positions in the respective reference genome is the first but ...
Angana Chakraborty   +2 more
doaj   +1 more source

Runtime comparison to detect index mutation on one sequence.

open access: yes, 2023
Runtime comparison to detect index mutation on one sequence.
Ayu Purwarianti (15910214)   +3 more
core   +1 more source

Repeated Web Page Visits and the Scanpath Theory: A Recurrent Pattern Detection Approach

open access: yesJournal of Eye Movement Research, 2010
This paper investigates the eye movement sequences of users visiting web pages repeatedly. We are interested in potential habituation due to repeated exposure.
Michael Burmester, Marcus Mast
doaj   +1 more source

Progress in quickly finding orthologs as reciprocal best hits: comparing blast, last, diamond and MMseqs2

open access: yesBMC Genomics, 2020
Background Finding orthologs remains an important bottleneck in comparative genomics analyses. While the authors of software for the quick comparison of protein sequences evaluate the speed of their software and compare their results against the most ...
Julie E. Hernández-Salmerón   +1 more
doaj   +1 more source

Sequence-specific sequence comparison using pairwise statistical significance [PDF]

open access: yes, 2013
Sequence comparison is one of the most fundamental computational problems in bioinformatics for which many approaches have been and are still being developed.
Agrawal, Ankit, Ankit Agrawal
core   +1 more source

Comparative and phylogenetic analysis of complete chloroplast genomes from seven Neocinnamomum taxa (Lauraceae)

open access: yesFrontiers in Plant Science, 2023
The genus Neocinnamomum is considered to be one of the most enigmatic groups in Lauraceae, mainly distributed in tropical and subtropical regions of Southeast Asia. The genus contains valuable oilseed and medicinal tree species.
Zhengying Cao   +14 more
doaj   +1 more source

GSAlign: an efficient sequence alignment tool for intra-species genomes

open access: yesBMC Genomics, 2020
Background Personal genomics and comparative genomics are becoming more important in clinical practice and genome research. Both fields require sequence alignment to discover sequence conservation and variation.
Hsin-Nan Lin, Wen-Lian Hsu
doaj   +1 more source

Uricase sequence identity comparison.

open access: yes, 2016
Uricase sequence identity comparison.
James C. Geoghegan (214152)   +27 more
core   +1 more source

Structure-based sequence comparison versus structure comparison.

open access: yes, 2019
Structure-based sequence comparison versus structure comparison.
Philipp Hornburg (1998727)   +6 more
core   +1 more source

Genomic Analysis of a Novel Torradovirus “Rehmannia Torradovirus Virus”: Two Distinct Variants Infecting Rehmannia glutinosa

open access: yesMicroorganisms
Rehmannia glutinosa, a crucial medicinal plant native to China, is extensively cultivated across East Asia. We used high-throughput sequencing to identify viruses infecting R. glutinosa with mosaic, leaf yellowing, and necrotic symptoms.
Yanhong Qin   +11 more
doaj   +1 more source

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