Results 181 to 190 of about 1,093 (205)
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Multiplexed Single‐Nucleus RNA Sequencing Using Lipid‐Oligo Barcodes

Current Protocols, 2022
AbstractThis protocol describes a robust pipeline for simultaneously analyzing multiple samples by single‐nucleus (sn)RNA‐seq. cDNA obtained from each single sample are labeled with the same lipid‐coupled oligonucleotide barcode (10X Genomics). Nuclei from as many as 12 individual samples can be pooled together and simultaneously processed for cDNA ...
Qi, Zhang   +6 more
openaire   +2 more sources

Single nucleus RNA-sequencing: how it's done, applications and limitations

Emerging Topics in Life Sciences, 2021
Single nuclei RNA-sequencing (sNuc-Seq) is a methodology which uses isolated nuclei instead of whole cells to profile gene expression. By using droplet microfluidic technologies, users are able to profile thousands of single transcriptomes at high throughput from their chosen tissue.
Juliane Fischer, Thomas Ayers
openaire   +2 more sources

Updated skin transcriptomic atlas depicted by reciprocal contribution of single-nucleus RNA sequencing and single-cell RNA sequencing

Journal of Dermatological Science, 2023
Single-cell RNA sequencing (scRNA-seq) has advanced our understanding of skin biology, but its utility is restricted by the requirement of fresh samples, inadequate dissociation-induced cell loss or death, and activation during tissue digestion. Single-nucleus RNA sequencing (snRNA-seq) can use frozen, hard-to-dissociate materials, which might be a ...
Ronghui Zhu   +2 more
exaly   +3 more sources

Large-Scale Single-Nucleus RNA Sequencing Compatible with Complex Archived Samples

2022
Transcriptome profiling at single-cell resolution allows us to identify and assess functional cell types and cellular states, including those within degenerating ocular tissues in retinitis pigmentosa. The technology is particularly valuable when studying tissues with high cellular heterogeneity, or when specific cell types are of interest.
Chao-Yu, Liu, Hsu-Hsin, Chen
openaire   +2 more sources

Single-nucleus RNA sequencing of diabetic mice

Mice were deeply anesthetized with isoflurane and hippocampus tissues were rapidly dissected for snRNA-seq.
openaire   +1 more source

Single-nucleus RNA sequencing of rostral ventromedial medulla in mice with trigeminal neuralgia

International Journal of Neuroscience
Aim: To investigate the transcriptional changes and cell interactions following trigeminal neuralgia (TN) in different cell types in rostral ventromedial medulla (RVM).Methods: In this study, trigeminal neuropathic pain was induced in mice by ligating the left infraorbital nerve. Ten days after nerve ligation, we performed single-nucleus RNA sequencing
Xia, Zhang   +6 more
openaire   +2 more sources

Single Nucleus Total RNA Sequencing of Formalin‐Fixed Paraffin‐Embedded Gliomas

Small Methods
AbstractGliomas, the predominant form of brain cancer, comprise diverse malignant subtypes with limited curative therapies available. The insufficient understanding of their molecular diversity and evolutionary processes hinders the advancement of new treatments.
Ziye Xu   +12 more
openaire   +2 more sources

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