Results 161 to 170 of about 2,188,564 (214)

Selection for folding stability predicts observed covariation between protein positions in the PDB

Saebi F, Minning J, Bastolla U.
europepmc   +1 more source

Small Molecule Activators of Protein Phosphatase 2A Exert Global Stabilizing Effects on the Scaffold PR65. [PDF]

JACS Au
Naqvi MM, Zacharopoulou M, Saha S, Banerjee A, Yilmaz SZ, Sunderlikova V, Johnson CM, Kumita JR, Yang SH, Gordon R, Ohlmeyer M, Tans SJ, Gur M, Bahar I, Itzhaki LS.   +14 more
europepmc   +1 more source

Promiscuous stimulation of HSP70 ATPase activity by parasite‐derived J‐domains

FEBS Open Bio, EarlyView.
The malaria parasite Plasmodium falciparum exports three highly homologous yet functionally divergent J‐domain proteins into human erythrocytes. Here, we show that J‐domains isolated from all three proteins effectively stimulate the ATPase activity of both endogenous host and exported parasite HSP70 chaperones.
Julian Barth, Moritz Koch, Le‐Han Rössner, Johanna Eichhorn, Denys Pogoryelov, Matthias P. Mayer, Jude M. Przyborski   +6 more
wiley   +1 more source

My Story and Me: protocol for a feasibility study of a personalised public mental health intervention for young women aged 14-18 years. [PDF]

BMJ Open
Labno A, Abel KM, Aked H, Bhui K, Brooks H, Crease M, Deighton J, Edridge C, Fonagy P, Grace E, Heslin M, Leyera ST, Nisbet K, Obateru A, Norton S, Ravaccia G, Stapley E, Edbrooke-Childs J.   +17 more
europepmc   +1 more source

Single‐molecule DNA flow‐stretch assays for high‐throughput DNA–protein interaction studies

FEBS Open Bio, EarlyView.
We describe an optimised single‐molecule DNA flow‐stretch assay that visualises DNA–protein interactions in real time. Linear DNA fragments are tethered to a surface and stretched by buffer flow for fluorescence imaging. Using λ and φX174 DNA, this protocol enhances reproducibility and accessibility, providing a versatile approach for studying diverse ...
Ayush Kumar Ganguli, Mohammad Nour Alsamsam, Ugnė Bagdonaitė, Van Truc Vu, Chun‐Jen Huang, Polina Kuzhir, Mindaugas Zaremba, Aurimas Kopūstas, Marijonas Tutkus   +8 more
wiley   +1 more source

Predicting unknown binding sites for transition-metal-based compounds in proteins. [PDF]

PLoS One
Levy A, Rothlisberger U.
europepmc   +1 more source

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

FEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill, Yelyzaveta Pulnova, Elke De Zitter, Helen M. Ginn, Briony A. Yorke   +4 more
wiley   +1 more source

Enzyme Reset: Water-Mediated Tautomerization Restores the Catalytic Asparagine in Protein <i>O</i>-Fucosyltransferase 1. [PDF]

J Chem Inf Model
Vidal-Gironès Ò, Trizio E, Kang P, Parrinello M, Rivas-Fernández JP, Rovira C.   +5 more
europepmc   +1 more source

Screening and epitope characterization of Nidogen‐2‐specific nanobodies

FEBS Open Bio, EarlyView.
Camel immunization and phage display were employed to generate high‐affinity VHH nanobodies against Nidogen‐2. After library construction, biopanning, ELISA screening, sequencing, and recombinant expression, selected nanobodies were purified and characterized, leading to the preliminary exploration of a nanobody‐based sandwich ELISA for specific ...
Jianchuan Wen, Qianqian Cui, Zhongyun Lan, Yingjun Wang, Shuaiying Zhao, Wenxuan Feng, Yunfeng Liu, Qiting Huang, Dongna Zhang, Jianfeng Xu   +9 more
wiley   +1 more source

How Fe(II)/2-Oxoglutarate Oxygenase Chooses Chlorination over Hydroxylation: Electric Field-Driven Ligand Exchange Governs C-Cl Formation. [PDF]

J Am Chem Soc
Jaber Sathik Rifayee SB, Thomas MG, Krishnan A, Gupta K, Davis C, Karabencheva-Christova T, Christov CZ.   +6 more
europepmc   +1 more source