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ESKEMAP: exact sketch-based read mapping [PDF]
Algorithms for Molecular BiologyBackground Given a sequencing read, the broad goal of read mapping is to find the location(s) in the reference genome that have a “similar sequence”. Traditionally, “similar sequence” was defined as having a high alignment score and read mappers were ...
Tizian Schulz, Paul Medvedev
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Density-reducing Jaccard estimators for sketch-based long read applications [PDF]
BMC BioinformaticsSequence sketching—a class of techniques aimed at generating compact representations of longer sequences—has become widely used in numerous long read applications, including assembly and mapping.
Tazin Rahman, Ananth Kalyanaraman
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Probing mental representations of space through sketch mapping: a scoping review [PDF]
Cognitive ResearchCognitive maps are mental representations of space essential for guiding spatial behavior. To assess the properties of these cognitive maps, sketch mapping has been widely used as a research tool in spatial cognition research. This scoping review aims to
M. Simonet +8 more
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Exact Sketch-Based Read Mapping
Algorithms in Bioinformatics (WABI 2023), 2023 AbstractGiven a sequencing read, the broad goal of read mapping is to find the location(s) in the reference genome that have a “similar sequence”. Traditionally, “similar sequence” was defined as having a high alignment score and read mappers were viewed as heuristic solutions to this well-defined problem.
Schulz, Tizian +4 more
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The Sketch Map Tool Facilitates the Assessment of OpenStreetMap Data for Participatory Mapping
ISPRS International Journal of Geo-Information, 2021 A worldwide increase in the number of people and areas affected by disasters has led to more and more approaches that focus on the integration of local knowledge into disaster risk reduction processes.
Carolin Klonner +9 more
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Iconarp International Journal of Architecture and Planning, 2021 Purpose The main purpose of the paper is to define historical landscapes through locals’ perspectives and employs community mapping as a tool for defining and transferring perceived landscape elements Design/Methodology/Approach The method used in ...
Bilge Hatun Ay, Aysun Tuna
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Land, 2017 Participatory mapping of local land use as the basis for planning and decision-making has become widespread around the globe. However, still relatively little is known about the conceptual underpinnings of geographic information produced through ...
Flurina M. Wartmann, Ross S. Purves
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Using different mapping techniques and GIS programs in the analysis and visualisation of mental maps
Polish Cartographical Review, 2021 The paper presents the review of mapping techniques applied in research using mental maps. The review covers both evaluative and structural mapping. The choice of a method is influenced by the level of freedom given to the respondents while creating ...
Szombara Stanisław
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Seasonal variations in thermal perception of urban environments: Summer and winter in-situ assessment from a Central European town [PDF]
Geographica PannonicaGrowing urbanisation, together with extreme weather events, negatively affects urban populations worldwide. Recent urban climate studies demonstrate that people-oriented approaches are needed to effectively target adaptation measures and thus improve ...
Květoňová Veronika +3 more
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COLLECTIVE SPATIAL COGNITION OF KIDS IN COMMUNITY MAPPINGS [PDF]
The International Archives of the Photogrammetry, Remote Sensing and Spatial Information Sciences, 2019 Due to the importance of spatial data in decision making and the cost of collecting these data, in recent years various communities have collaborated on spatial data collection.
A. Zare Zardiny, F. Hakimpour
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