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SNPs on Chips: The Hidden Genetic Code in Expression Arrays
Biological Psychiatry, 2007Gene expression microarray analysis in postmortem brains is one of the fastest growing fields of psychiatric research. Here we show that common polymorphisms (SNPs) present on probe sets can masquerade as significant "gene expression" differences. After first observing this artifact in the Catechol-O-methyl transferase (COMT) gene, we replicate the ...
Edward G. Jones+10 more
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Estimation of Missing Values in SNP Array
2014DNA microarray usage in genetics is rapidly proliferating, generating huge amount of data. It is estimated that around 5-20% of measurements do not succeed, leading to missing values in the data destined for further analysis. Missing values in further microarray analysis lead to low reliability, therefore there is a need for effective and efficient ...
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Use of SNP-Arrays for ChIP Assays: Computational Aspects
2009The simultaneous genotyping of thousands of single nucleotide polymorphisms (SNPs) in a genome using SNP-Arrays is a very important tool that is revolutionizing genetics and molecular biology. We expanded the utility of this technique by using it following chromatin immunoprecipitation (ChIP) to assess the multiple genomic locations protected by a ...
Enrique M. Muro+3 more
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Development of an Axiom Sugarcane100K SNP array for genetic map construction and QTL identification
Theoretical and Applied Genetics, 2019Qian You+8 more
semanticscholar +1 more source
Exploring the cause of early miscarriage with SNP-array analysis and karyotyping
Journal of Maternal-Fetal & Neonatal Medicine, 2019S. Qu+6 more
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An updated felCat5 SNP manifest for the Illumina Feline 63k SNP genotyping array
Animal Genetics, 2014Cali E. Willet, Bianca Haase
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Clinical application of SNP array analysis in firstātrimester pregnancy loss: a prospective study
Clinical Genetics, 2017Y. Wang+11 more
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