Results 301 to 310 of about 223,459 (323)
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SNP Genotyping by Heteroduplex Analysis
2014Heteroduplex-based genotyping methods have proven to be technologically effective and economically efficient for low- to medium-range throughput single-nucleotide polymorphism (SNP) determination. In this chapter we describe two protocols that were successfully applied for SNP detection and haplotype analysis of candidate genes in association studies ...
Paniego, Norma Beatriz +3 more
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SNP Genotyping Using KASPar Assays
2014In a separate chapter we describe a simple method for single nucleotide polymorphism (SNP) discovery using genomic reduction. Here we describe a scalable and cost-effective SNP genotyping method based on KBioscience's competitive allele-specific PCR amplification of target sequences and endpoint fluorescence genotyping (KASPar™) using a FRET capable ...
Scott M, Smith, Peter J, Maughan
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Genotyping SNPs With the LightCycler
2004Here, a single nucleotide polymorphism typing methodology is described based on polymerase chain reaction monitoring, in real time, of fluorescently labeled amplified products using the LightCycler. The main advantages of the system are the time required for the analysis (about 20 min), combined with the robustness, accuracy, and the sensitivity of the
María Victoria, Lareu +1 more
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SNP Genotyping: The KASP Assay
2014The KASP genotyping assay utilizes a unique form of competitive allele-specific PCR combined with a novel, homogeneous, fluorescence-based reporting system for the identification and measurement of genetic variation occurring at the nucleotide level to detect single nucleotide polymorphisms (SNPs) or inserts and deletions (InDels).
Chunlin, He +2 more
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SNP Genotyping with Amplifluor-Like Method
2023For SNP genotyping, amplification of fluorescence (Amplifluor) is a popular and actively developing method in the plant sciences. The "Amplifluor-like" is a "home-made" modification of the original commercial Amplifluor method. Amplifluor-like genotyping requires two essential components: (1) two allele-specific forward primers targeting the SNP site ...
Gulmira, Khassanova +6 more
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High-Throughput SNP Genotyping
2015The development of next-generation sequencing (NGS) methods has helped the emergence of single nucleotide polymorphism (SNP) as the marker of choice. The SNPs are becoming increasingly popular in view of their abundance, ease in discovery, and the extremely high-throughput SNP genotyping at relatively low cost per data point. High-throughput genotyping
B. D. Singh, A. K. Singh
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SNP Genotyping: Technologies and Biomedical Applications
Annual Review of Biomedical Engineering, 2007Single nucleotide polymorphisms (SNPs) are the most frequently occurring genetic variation in the human genome, with the total number of SNPs reported in public SNP databases currently exceeding 9 million. SNPs are important markers in many studies that link sequence variations to phenotypic changes; such studies are expected to advance the ...
Sobin, Kim, Ashish, Misra
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High-Throughput Methods for SNP Genotyping
2009Single nucleotide polymorphisms (SNPs) are ideal markers for identifying genes associated with complex diseases for two main reasons. Firstly, SNPs are densely located on the human genome at about one SNP per approximately 500-1,000 base pairs. Secondly, a large number of commercial platforms are available for semiautomated or fully automated SNP ...
Chunming, Ding, Shengnan, Jin
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2007
The identification of genes affecting complex traits (i.e., biological traits affected by several genetic and environmental factors) is a very difficult and challenging task (1, 2, 3). For many complex traits, the observable variation between individuals is quantitative; hence, loci affecting such traits are generally termed quantitative trait loci ...
Jun Wang +3 more
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The identification of genes affecting complex traits (i.e., biological traits affected by several genetic and environmental factors) is a very difficult and challenging task (1, 2, 3). For many complex traits, the observable variation between individuals is quantitative; hence, loci affecting such traits are generally termed quantitative trait loci ...
Jun Wang +3 more
openaire +1 more source
Allele-Specific PCR in SNP Genotyping
2009The increasing need for large-scale genotyping applications of single nucleotide polymorphisms (SNPs) in model and nonmodel organisms requires the development of low-cost technologies accessible to minimally equipped laboratories. The method presented here allows efficient discrimination of SNPs by allele-specific PCR in a single reaction with standard
Gaudet Muriel +3 more
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