Detecting cryptic ghost lineage introgression in four‐taxon genomic datasets
Abstract Premise Hybridization and introgression are pervasive evolutionary forces that have played fundamental roles in shaping the diversity of wild and domesticated plants. Four‐taxon tests for introgression provide a reliable framework for detecting signatures of ancient introgression from genomic data, which have played an important role in ...
Evan S. Forsythe +3 more
wiley +1 more source
Experimental-data-driven thermal conductivity prediction and inverse composition design for alloys. [PDF]
Phan AD +5 more
europepmc +1 more source
A cost‐effective DNA extraction protocol for long‐read sequencing in non‐model plants
Abstract Premise Third‐generation sequencing has revolutionized genomics, enabling in‐depth analysis of genome sequence, structure, and epigenetic features. Yet, extracting high‐quality DNA for long‐read sequencing remains a bottleneck—particularly in non‐model plants, such as mature trees growing in natural environments, which often contain abundant ...
Sofia Gaischuk +6 more
wiley +1 more source
Carriage of hypervirulent and ESBL-producing <i>Klebsiella pneumoniae</i> complex among community-dwelling individuals in Japan. [PDF]
Watanabe A +4 more
europepmc +1 more source
Ancient hybridization and phylogenetic discordance: Exploring evolutionary complexity in Asteraceae
Abstract Premise Conflicting phylogenetic signals are common in plant phylogenomics and often reflect evolutionary histories shaped by processes like hybridization, incomplete lineage sorting, and whole‐genome duplication (WGD). We aimed to identify and assess these complex processes in the hyper‐diverse family Asteraceae to offer insight into the ...
Paige A. Ellestad +6 more
wiley +1 more source
Horizontal Gene Transfers Underpin Ribose Heterotrophy and Central Carbon Metabolism Remodeling in Gloeobacteraceae. [PDF]
Sudianto E, Baurain D, Cornet L.
europepmc +1 more source
Detecting introgression from phylogenetic invariant site patterns using machine learning
Abstract Premise Detecting historical introgression among populations or species from genomic data is a common goal in evolutionary genetics. Most current methods fall into two major categories: network inference and admixture inference. Network inference (e.g., SNaQ) is computationally challenging and typically requires first reducing large genomic ...
Patrick F. McKenzie, Deren A. R. Eaton
wiley +1 more source
Integrative linkage mapping and transcriptomic profiling uncover ozone-response modules in a peri-urban forest tree. [PDF]
Granados-Aguilar X +5 more
europepmc +1 more source
Editorial: Fruit trees under stress: physiological, biochemical, and molecular mechanisms. [PDF]
Qiu W.
europepmc +1 more source
Guiding and Manipulating Light Fields in Microstructured Liquid Crystals
This review summarizes recent advances in guided‐wave optics enabled by microstructured liquid crystal (LC) devices, covering their fundamental material properties, key degree of freedom for dynamic light field manipulations. The advances of linear guided‐wave optics, nonlinear‐optics with spatial optical solitons, and microlasers in LC‐based devices ...
Shan‐shan Chang +2 more
wiley +1 more source

