Identifying SSR Markers Related to Seed Fatty Acid Content in Perilla Crop (Perilla frutescens L.)
Plants, 2021 Perilla seed oil has been attracting attention in South Korea as a health food. Five fatty acids of 100 Perilla accessions were identified as follows: palmitic acid (PA) (5.10–9.13%), stearic acid (SA) (1.70–3.99%), oleic acid (OA) (11.1–21.9%), linoleic
Hyeon Park +4 more
doaj +2 more sources
Scientific Reports, 2021 The availability of well-assembled genome sequences and reduced sequencing costs have enabled the resequencing of many additional accessions in several crops, thus facilitating the rapid discovery and development of simple sequence repeat (SSR) markers ...
Gehendra Bhattarai +5 more
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Mining and Development of Novel SSR Markers Using Next Generation Sequencing (NGS) Data in Plants [PDF]
Molecules, 2018 Microsatellites, or simple sequence repeats (SSRs), are one of the most informative and multi-purpose genetic markers exploited in plant functional genomics.
S. Taheri +6 more
semanticscholar +2 more sources
Genome-Wide Analysis of Simple Sequence Repeats and Efficient Development of Polymorphic SSR Markers Based on Whole Genome Re-Sequencing of Multiple Isolates of the Wheat Stripe Rust Fungus. [PDF]
PLoS ONE, 2015 The biotrophic parasitic fungus Puccinia striiformis f. sp. tritici (Pst) causes stripe rust, a devastating disease of wheat, endangering global food security.
Huaiyong Luo +7 more
doaj +2 more sources
SSR Markers in the Genus Pistacia
Sustainable Crop Production, 2019 Simple sequence repeats (SSRs) are one of the most powerful molecular marker systems due to abundance in the genomes, its codominant nature, and high repeat-ability. P. vera L.
S. Kafkas
semanticscholar +4 more sources
The newly developed genomic-SSR markers uncover the genetic characteristics and relationships of olive accessions [PDF]
PeerJ, 2020 Background Olive (Olea europaea L.) is an important oil and fruit crop worldwide, owning a rich germplasm with a large number of cultivars. Simple sequence repeats (SSRs) are excellent markers and have been used for the identification of olive cultivars.
Danyang Li +7 more
doaj +3 more sources
Development and validation of new SSR markers from expressed regions in the garlic genome
Scientia Agricola, 2015 Only a limited number of simple sequence repeat (SSR) markers is available for the genome of garlic (Allium sativum L.) despite the fact that SSR markers have become one of the most preferred DNA marker systems.
Meryem Ipek +4 more
doaj +2 more sources
Association Mapping Analysis of Morphological Characteristics in F2 Population of Perilla (Perilla frutescens L.) Using SSR Markers [PDF]
PlantsTo identify SSR markers associated with both quantitative and qualitative traits in Perilla, we analyzed a total of 68 individuals from an F2 population derived from a cross between WPC06-339 (weedy var. crispa) and WPF17-049 (weedy var.
Tae Hyeon Heo +4 more
doaj +2 more sources
Genome-wide development of simple sequence repeat (SSR) markers at 2-Mb intervals in lotus (Nelumbo Adans.) [PDF]
BMC GenomicsBackground Despite the rapid advancement of high-throughput sequencing, simple sequence repeats (SSRs) remain indispensable molecular markers for various applied and research tasks owing to their cost-effectiveness and ease of use.
Fengluan Liu, Lin Xi, Naifeng Fu
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Identification of a Simple Sequence Repeat molecular-marker set for large-scale analyses of pear germplasm [PDF]
Crop Breeding and Applied Biotechnology, 2012 Simple Sequence Repeats (SSR) are molecular markers suitable to assess the genetic variation of germplasm resources; however, large-scale SSR use requires protocol optimization. The present work aimed to identify SSR markers, developed for pear and other
Gabriel Dequigiovanni +7 more
doaj +4 more sources