Results 91 to 100 of about 286,497 (273)

A light‐triggered Time‐Resolved X‐ray Solution Scattering (TR‐XSS) workflow with application to protein conformational dynamics

open access: yesFEBS Open Bio, EarlyView.
Time‐resolved X‐ray solution scattering captures how proteins change shape in real time under near‐native conditions. This article presents a practical workflow for light‐triggered TR‐XSS experiments, from data collection to structural refinement. Using a calcium‐transporting membrane protein as an example, the approach can be broadly applied to study ...
Fatemeh Sabzian‐Molaei   +3 more
wiley   +1 more source

Fixed point theorems for nonexpansive mappings on nonconvex sets in UCED Banach spaces

open access: yesInternational Journal of Mathematics and Mathematical Sciences, 2002
It is shown that every asymptotically regular or λ-firmly nonexpansive mapping T:C→C has a fixed point whenever C is a finite union of nonempty weakly compact convex subsets of a Banach space X which is uniformly convex in every direction.
Wei-Shih Du   +2 more
doaj   +1 more source

Cyclotomic Trace Codes

open access: yesAlgorithms, 2019
A generalization of Ding’s construction is proposed that employs as a defining set the collection of the sth powers ( s ≥ 2 ) of all nonzero elements in G F ( p m ) , where p ≥ 2 is prime.
Dean Crnković   +2 more
doaj   +1 more source

Analysing the significance of small conformational changes and low occupancy states in serial crystallographic data

open access: yesFEBS Open Bio, EarlyView.
This protocol paper outlines methods to establish the success of a time‐resolved serial crystallographic experiment, by means of statistical analysis of timepoint data in reciprocal space and models in real space. We show how to amplify the signal from excited states to visualise structural changes in successful experiments.
Jake Hill   +4 more
wiley   +1 more source

Detection of Network Motif Based on a Novel Graph Canonization Algorithm from Transcriptional Regulation Networks

open access: yesMolecules, 2017
Network motifs are patterns of complex networks occurring significantly more frequently than those in random networks. They have been considered as fundamental building blocks of complex networks.
Jialu Hu, Xuequn Shang
doaj   +1 more source

YIPFα1A expression is regulated by multilayered molecular mechanisms

open access: yesFEBS Open Bio, EarlyView.
YIPFα1A, a five‐pass Golgi protein, is regulated at multiple layers. (1) Rare‐codon enrichment drives translation‐coupled mRNA decay. (2) A proximal 3′‐UTR element stabilizes mRNA. (3) A distal 3′‐UTR element included by alternate poly(A) site usage represses translation, which can be overridden by the proximal 3′‐UTR element.
Tokio Takaji   +2 more
wiley   +1 more source

Transitive combinatorial structures invariant under some subgroups of S(6,2) and related codes

open access: yesAtti della Accademia Peloritana dei Pericolanti : Classe di Scienze Fisiche, Matematiche e Naturali, 2018
In this paper we define combinatorial structures on the conjugacy classes of the maximal subgroups of the symplectic group S(6,2) under the action of two subgroups of S(6,2) isomorphic to U(3,3) or U(4,2).
Dean Crnković   +2 more
doaj   +1 more source

Optimizing photoactivation of PA‐mCherry for optical pooled CRISPR screens

open access: yesFEBS Open Bio, EarlyView.
Photoactivatable PA‐mCherry finds widespread use to optically tag individual cells. However, confocal 405 nm UV laser‐scanning (normal scan) is much less efficient than widefield UV illumination, limiting the use of PA‐mCherry on confocal instruments. We remedy this limitation by reporting that rapid and repeated confocal scanning with a low‐intensity,
Sravasti Mukherjee   +3 more
wiley   +1 more source

Self-Dual and LCD Codes from Kneser Graphs K(n, 2) and Generalized Quadrangles

open access: yesMathematics
In this paper, we study self-dual and LCD codes constructed from Kneser graphs K(n, 2) and collinearity graphs of generalized quadrangles using the so-called pure and bordered construction. We determine conditions under which these codes are self-dual or
Dean Crnković, Ana Grbac
doaj   +1 more source

Generalized bent Boolean functions and strongly regular Cayley graphs [PDF]

open access: yes, 2017
In this paper we define the (edge-weighted) Cayley graph associated to a generalized Boolean function, introduce a notion of strong regularity and give several of its properties.
Gangopadhyay, Sugata   +2 more
core   +1 more source

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