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Do Structurally Similar Ligands Bind in a Similar Fashion?
Journal of Medicinal Chemistry, 2006The scope of the current work is to investigate whether structurally similar ligands bind in a similar fashion by exhaustively analyzing experimental data from the protein database (PDB). The complete PDB was searched for pairs of structurally similar ligands binding to the same biological target.
Jonas, Boström +2 more
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Sentence Similarity on Structural Representations
2016Most previous approaches used various kinds of plain similarity features to represent the similarity of a sentence pair, and one of its limitations is its weak representation ability. This paper introduces the relational structures representation (shallow syntactic tree, dependency tree) to compute sentence similarity.
Meng Yang, Peifeng Li, Qiaoming Zhu
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Similarity ranking technique exploiting the structure of similarity relationships
Computing, 2020This paper proposes a similarity ranking technique that exploits the entire network structure of similarity relationships for multimedia, particularly image, databases. The main problem in the similarity ranking on multimedia is the meaning gap between the characteristics automatically computed from the multimedia dataset and the interpretation by ...
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Similarity measures for structured representations
1994A key concept in case-based reasoning is similarity. In this paper, we first propose a similarity measure for structured representations that is based on graph edit operations. Then we show how this similarity measure can be computed by means of state space search.
Horst Bunke, Bruno T. Messmer
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Learnability and Definability in Trees and Similar Structures
Theory of Computing Systems, 2002The problem of concept learning is to identify an unknown set from a given family of sets. A universe is a nonempty finite set \(A\). A vocabulary \(\tau\) is a finite set of predicates defined on \(A\). A structure is the pair (\(A,\tau\)). An atomic formula is \({x = y}\) or \({R(x_1,\dots ,x_r)}\), where \({R \in \tau}\).
Martin Grohe, György Turán
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Beyond topical similarity: a structural similarity measure for retrieving highly similar documents
Knowledge and Information Systems, 2006Accurately measuring document similarity is important for many text applications, e.g. document similarity search, document recommendation, etc. Most traditional similarity measures are based only on “bag of words” of documents and can well evaluate document topical similarity.
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Structural similarity in figurative language: A preliminary cognitive analysis
Lingua, 2023FRANCISCO José Ruiz De Mendoza Ibáñez +1 more
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The Calculation of Molecular Structural Similarity: Principles and Practice
Molecular Informatics, 2014Peter Willett
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