Results 151 to 160 of about 37,210 (201)

Whole-genome sequencing bulked segregant analysis uncovered FW7, a Fusarium wilt resistance gene masked by epistasis in octoploid strawberry. [PDF]

Plant Genome
Vachev MV, Bjornson M, Pincot DDA, Famula RA, Lovell JT, Harder AM, Handley LH, Grimwood J, Brukental H, Lòpez CM, Cole GS, Feldmann MJ, Knapp SJ.   +12 more
europepmc   +1 more source

Labeled dataset of X-ray protein ligand images in 3D point cloud and validated deep learning models. [PDF]

Sci Data
Bazzano CF, Alves LFG, Telles GP, Trivella DBB.   +3 more
europepmc   +1 more source

b-move: faster lossless approximate pattern matching in a run-length compressed index. [PDF]

Algorithms Mol Biol
Depuydt L, Renders L, Van de Vyver S, Veys L, Gagie T, Fostier J.   +5 more
europepmc   +1 more source

Formal verification of bioinformatics software using model checking and theorem proving. [PDF]

Brief Bioinform
Weerasena H, Jayasena A, Boucher C, Mishra P.   +3 more
europepmc   +1 more source

A multi-dimensional DNS domain intelligence dataset for cybersecurity research. [PDF]

Data Brief
Hranický R, Ondryáš O, Horák A, Pouč P, Jeřábek K, Ebert T, Polišenský J.   +6 more
europepmc   +1 more source

The FORGENIUS Genomic Resources: New Genotyping Tools and Genomic Data for 23 Forest Tree Species and Their Genetic Conservation Units. [PDF]

Mol Ecol Resour
Pinosio S, Bagnoli F, Avanzi C, Castellani MB, Frascella A, McEvoy SL, Olsson S, Spanu I, Vajana E, FORGENIUS Consortium, González-Martínez SC, Pyhäjärvi T, Scotti I, Vendramin GG, Piotti A.   +14 more
europepmc   +1 more source

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Sampled suffix array with minimizers

Software - Practice and Experience, 2017
SummarySampling (evenly) the suffixes from the suffix array is an old idea trading the pattern search time for reduced index space. A few years ago Claudeet al.showed an alphabet sampling scheme allowing for more efficient pattern searches compared with the sparse suffix array, for long enough patterns.
Szymon Grabowski, Marcin Raniszewski
exaly   +2 more sources

Property Suffix Array with Applications

Lecture Notes in Computer Science, 2018
The suffix array is one of the most prevalent data structures for string indexing; it stores the lexicographically sorted list of suffixes of a given string. Its practical advantage compared to the suffix tree is space efficiency. In Property Indexing, we are given a string x of length n and a property \(\varPi \), i.e.
Panagiotis Charalampopoulos, Costas S Iliopoulos, Solon P Pissis   +2 more
exaly   +2 more sources

Suffix Arrays on Words

2007
Surprisingly enough, it is not yet known how to build directly a suffix array that indexes just the k positions at word-boundaries of a text T[1, n], taking O(n) time and O(k) space in addition to T. We propose a class-note solution to this problem that achieves such optimal time and space bounds.
FERRAGINA, PAOLO, FISCHER J.
openaire   +1 more source

Suffix Array Construction

2008
Juha Kärkkäinen
exaly   +2 more sources