Results 61 to 70 of about 679,088 (213)
Suffix Tree Construction and Storage with Limited Main Memory [PDF]
, 2003 Schürmann K-B, Stoye J. Suffix Tree Construction and Storage with Limited Main Memory. Forschungsberichte. Bielefeld: Technische Fakultät der Universität Bielefeld; 2003.Suffix trees have been established as one of the most versatile index structures for
Schürmann, Klaus-Bernd +1 more
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Faster suffix tree construction with missing suffix links [PDF]
Proceedings of the thirty-second annual ACM symposium on Theory of computing, 2000 Summary: We consider suffix tree construction for situations with missing suffix links. Two examples of such situations are suffix trees for parameterized strings and suffix trees for two-dimensional arrays. These trees also have the property that the node degrees may be large.
Cole, Richard, Hariharan, Ramesh
openaire +3 more sources
How generics obscure the logic of conditionals
Mind &Language, EarlyView.This paper discusses counter‐examples to modus ponens and modus tollens involving modals and quantificational adverbs, and presents new counter‐examples with generic conditionals. We argue that the counter‐examples are spurious, and are explained by the domain‐restricting effects of if‐clauses.
Daniel Lassiter +3 more
wiley +1 more source
Plant Breeding, EarlyView.ABSTRACT Genomic prediction is widely used in plant breeding, but feature‐attribution scores from predictive models are sometimes interpreted as evidence for trait‐associated or causal loci. We evaluated whether global SHapley Additive exPlanations (SHAP) from XGBoost and LightGBM prioritize markers or genomic windows enriched for signals from mixed ...
Francisco Orts
wiley +1 more source
The new approach of multiple genome sequence matching based on GPU
四川大学学报. 自然科学版, 2017 Suffix trees and suffix arrays have been used widely in bioinformatics applications, especially for DNA sequence alignments in the initial exact match phase of heuristic algorithms.
DING Sha, ZHAO Shi-Yuan, LIN Tao
doaj
Plant, Cell &Environment, EarlyView.ABSTRACT Brassica napus (canola) is a significant contributor to the world's oil production and is cultivated across continents, yet acidic soils with aluminium (Al3+) and manganese (Mn2+) toxicities limit its production. The genetic determinants underlying natural variation for acidic soil tolerance in canola are unknown and need to be determined ...
Harsh Raman +13 more
wiley +1 more source
, 2020 This thesis discusses structure of suffix trees, their implementation and problematics, we can solved with suffix trees. The thesis also focuses on construction of suffix trees, with usage of Ukkonen's algorithm. Apart of implementation of this structure
Chlubna, Pavel
core
Suffix trees as language models
, 2023 Suffix trees are data structures that can be used to index a corpus. In this paper, we explore how some properties of suffix trees naturally provide the functionality of an n-gram language model with variable n.
Redd Kennington, Casey +2 more
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‘Chrystalline Talk’: Thomas Browne's Poetics of Concretion and Mineral Plain Style
Renaissance Studies, EarlyView.ABSTRACT This article charts the figuration, both material and rhetorical, of mineral bodies in early modern natural philosophy, paying particular attention to the second book of Thomas Browne's Pseudodoxia Epidemica (1646). It argues that concretions (stony calculi and crystals formed through the aggregation of physical matter) make manifest a mineral
Jess Dunmore
wiley +1 more source
Finding all maximal perfect haplotype blocks in linear time
Algorithms for Molecular Biology, 2020 Recent large-scale community sequencing efforts allow at an unprecedented level of detail the identification of genomic regions that show signatures of natural selection.
Jarno Alanko +4 more
doaj +1 more source