Results 31 to 40 of about 66,265 (280)

Identification and frequency of transposable elements in Eucalyptus

open access: yesGenetics and Molecular Biology, 2005
Transposable elements (TE) are major components of eukaryotic genomes and involved in cell regulation and organism evolution. We have analyzed 123,889 expressed sequence tags of the Eucalyptus Genome Project database and found 124 sequences representing ...
Maurício Bacci Jr.   +7 more
doaj   +1 more source

Insertion sequence inversions mediated by ectopic recombination between terminal inverted repeats. [PDF]

open access: yesPLoS ONE, 2010
Transposable elements are widely distributed and diverse in both eukaryotes and prokaryotes, as exemplified by DNA transposons. As a result, they represent a considerable source of genomic variation, for example through ectopic (i.e.
Alison Ling, Richard Cordaux
doaj   +1 more source

Plant Transposable Elements

open access: yes, 2008
Genomic programs are yielding tremendous amounts of data about plant genomes and their expression. In order to exploit and understand this data it will be necessary to determine the mechanisms leading to natural variation of patterns of gene expression.
Deragon, Jean-Marc   +2 more
openaire   +5 more sources

MUSTv2: An Improved De Novo Detection Program for Recently Active Miniature Inverted Repeat Transposable Elements (MITEs)

open access: yesJournal of Integrative Bioinformatics, 2017
Miniature inverted repeat transposable element (MITE) is a short transposable element, carrying no protein-coding regions. However, its high proliferation rate and sequence-specific insertion preference renders it as a good genetic tool for both natural ...
Ge Ruiquan   +5 more
doaj   +1 more source

A specific insertion of a solo-LTR characterizes the Y-chromosome of Bryonia dioica (Cucurbitaceae)

open access: yesBMC Research Notes, 2010
Background Relatively few species of flowering plants are dioecious and even fewer are known to have sex chromosomes. Current theory posits that homomorphic sex chromosomes, such as found in Bryonia dioica (Cucurbitaceae), offer insight into the early ...
Renner Susanne S   +2 more
doaj   +1 more source

Stem loop sequences specific to transposable element IS605 are found linked to lipoprotein genes in Borrelia plasmids. [PDF]

open access: yesPLoS ONE, 2009
BACKGROUND:Plasmids of Borrelia species are dynamic structures that contain a large number of repetitive genes, gene fragments, and gene fusions. In addition, the transposable element IS605/200 family, as well as degenerate forms of this IS element, are ...
Nicholas Delihas
doaj   +1 more source

Hematopoietic (stem) cells—The elixir of life?

open access: yesFEBS Letters, EarlyView.
The aging of HSCs (hematopoietic stem cells) and the blood system leads to the decline of other organs. Rejuvenating aged HSCs improves the function of the blood system, slowing the aging of the heart, kidney, brain, and liver, and the occurrence of age‐related diseases.
Emilie L. Cerezo   +4 more
wiley   +1 more source

Tools and best practices for retrotransposon analysis using high-throughput sequencing data

open access: yesMobile DNA, 2019
Background Sequencing technologies give access to a precise picture of the molecular mechanisms acting upon genome regulation. One of the biggest technical challenges with sequencing data is to map millions of reads to a reference genome. This problem is
Aurélie Teissandier   +3 more
doaj   +1 more source

Regulatory regions in natural transposable element insertions drive interindividual differences in response to immune challenges in Drosophila

open access: yesGenome Biology, 2021
Background Variation in gene expression underlies interindividual variability in relevant traits including immune response. However, the genetic variation responsible for these gene expression changes remains largely unknown.
Anna Ullastres   +2 more
doaj   +1 more source

Transposable elements in Drosophila [PDF]

open access: yesMobile DNA, 2020
AbstractDrosophila has been studied as a biological model for many years and many discoveries in biology rely on this species. Research on transposable elements (TEs) is not an exception. Drosophila has contributed significantly to our knowledge on the mechanisms of transposition and their regulation, but above all, it was one of the first organisms on
Mérel, Vincent   +3 more
openaire   +4 more sources

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