Results 31 to 40 of about 2,371,477 (389)

Performance analysis of control allocation using data‐driven integral quadratic constraints

open access: yesAdvanced Control for Applications, Volume 4, Issue 4, December 2022., 2022
Abstract A new method is presented for evaluating the performance of a nonlinear control allocation system within a linear control loop. To that end, a worst‐case gain analysis problem is formulated that can be readily solved by means of well‐established methods from robustness analysis using integral quadratic constraints (IQCs).
Manuel Pusch   +2 more
wiley   +1 more source

Host-parasite relationships in the genome

open access: yesBMC Biology, 2011
Transposable elements are best interpreted as genomic parasites, proliferating in genomes through their over-replication relative to the rest of the genome. A new study examining correlations across Drosophila species between transposable element numbers
Brookfield John FY
doaj   +1 more source

Transposable element insertions have strongly affected human evolution [PDF]

open access: yes, 2010
Comparison of a full collection of the transposable element (TE) sequences of vertebrates with genome sequences shows that the human genome makes 655 perfect full-length matches.
Britten, Roy J.
core   +2 more sources

Transposable Elements and the Evolution of Insects [PDF]

open access: yesAnnual Review of Entomology, 2021
Insects are major contributors to our understanding of the interaction between transposable elements (TEs) and their hosts, owing to seminal discoveries, as well as to the growing number of sequenced insect genomes and population genomics and functional studies.
Gilbert, Clément   +2 more
openaire   +6 more sources

RepeatModeler2: automated genomic discovery of transposable element families

open access: yesbioRxiv, 2019
The accelerating pace of genome sequencing throughout the tree of life is driving the need for improved unsupervised annotation of genome components such as transposable elements (TEs).
Jullien M. Flynn   +6 more
semanticscholar   +1 more source

Splinkerette PCR for mapping transposable elements in Drosophila. [PDF]

open access: yesPLoS ONE, 2010
Transposable elements (such as the P-element and piggyBac) have been used to introduce thousands of transgenic constructs into the Drosophila genome.
Christopher J Potter, Liqun Luo
doaj   +1 more source

Benchmarking transposable element annotation methods for creation of a streamlined, comprehensive pipeline

open access: yesGenome Biology, 2019
Sequencing technology and assembly algorithms have matured to the point that high-quality de novo assembly is possible for large, repetitive genomes. Current assemblies traverse transposable elements (TEs) and provide an opportunity for comprehensive ...
Shujun Ou   +12 more
semanticscholar   +1 more source

DNA methylation enables transposable element-driven genome expansion

open access: yesProceedings of the National Academy of Sciences of the United States of America, 2020
Significance We examined recent whole-genome data of 53 organisms and found that the substantial differences in their genome sizes can be largely explained by the proportion of transposable elements (TEs) within them.
Wanding Zhou   +3 more
semanticscholar   +1 more source

Twenty years of transposable element analysis in the Arabidopsis thaliana genome

open access: yesMobile DNA, 2020
Transposable elements (TEs) are mobile repetitive DNA sequences shown to be major drivers of genome evolution. As the first plant to have its genome sequenced and analyzed at the genomic scale, Arabidopsis thaliana has largely contributed to our TE ...
H. Quesneville
semanticscholar   +1 more source

SERpredict: Detection of tissue- or tumor-specific isoforms generated through exonization of transposable elements [PDF]

open access: yesBMC Genetics 2007 8:78, 2008
Background: Transposed elements (TEs) are known to affect transcriptomes, because either new exons are generated from intronic transposed elements (this is called exonization), or the element inserts into the exon, leading to a new transcript. Several examples in the literature show that isoforms generated by an exonization are specific to a certain ...
arxiv   +1 more source

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