Results 181 to 190 of about 86,476 (288)

Ancient hybridization and phylogenetic discordance: Exploring evolutionary complexity in Asteraceae

open access: yesApplications in Plant Sciences, EarlyView.
Abstract Premise Conflicting phylogenetic signals are common in plant phylogenomics and often reflect evolutionary histories shaped by processes like hybridization, incomplete lineage sorting, and whole‐genome duplication (WGD). We aimed to identify and assess these complex processes in the hyper‐diverse family Asteraceae to offer insight into the ...
Paige A. Ellestad   +6 more
wiley   +1 more source

HybSuite: An integrated pipeline for hybrid capture phylogenomics from reads to trees

open access: yesApplications in Plant Sciences, EarlyView.
Abstract Premise Hybrid capture sequencing (Hyb‐Seq) is a widely used approach in phylogenomics, providing efficient access to targeted genomic regions. However, deriving high‐quality phylogenetic trees from raw sequencing reads requires extensive bioinformatics processing, which increases complexity, the risk of errors, and challenges in file ...
Yu‐Xuan Liu   +8 more
wiley   +1 more source

Allelic Imbalance and Chromothripsis Lead to Diversity in Japanese Tumor Genomes With Whole-Genome Duplication. [PDF]

open access: yesCancer Sci
Hatakeyama K   +11 more
europepmc   +1 more source

Genomic Structural Variations Provide Insights Into Litter Size and Teat Number Traits in Hu Sheep

open access: yesAnimal Research and One Health, EarlyView.
Here, we conducted whole genome sequencing on 300 Hu sheep with an average depth of 16.51X. Two candidate genes associated with litter size and teat number traits were identified, namely MAST2 and AFDN. ABSTRACT Litter size and the teat number are important economic indicators in sheep production.
Xin Xiang   +3 more
wiley   +1 more source

Whole genome duplication drives transcriptome reprogramming in response to drought in alfalfa. [PDF]

open access: yesPlant Cell Rep
Santoro DF   +4 more
europepmc   +1 more source

Higher Complement C4 Gene Copy Number Constitutes a Shared Genetic Risk Factor for Giant Cell Arteritis and IgA Vasculitis

open access: yesArthritis &Rheumatology, EarlyView.
Objective Low copy number (CN) of complement C4 isoforms and high CN of retroviral HERV‐K elements are known risk factors for many immune‐mediated inflammatory diseases (IMIDs), often showing sex‐biased effects. Here, we assessed whether CN variation within the C4 gene contributes to giant cell arteritis (GCA) and IgA vasculitis (IgAV), two complex ...
Laura Martínez‐Gutiérrez   +295 more
wiley   +1 more source

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