Results 121 to 130 of about 1,158,172 (358)

Perspectives in educating molecular pathologists on liquid biopsy: Toward integrative, equitable, and decentralized precision oncology

Molecular Oncology, EarlyView.
Liquid biopsy enables minimally invasive, real‐time molecular profiling through analysis of circulating biomarkers in biological fluids. This Perspective highlights the importance of training pathologists through integrative educational programs, such as the European Masters in Molecular Pathology, to ensure effective and equitable implementation of ...
Marius Ilié, Umberto Malapelle, Catherine Alix‐Panabières, Claus Lindbjerg Andersen, Sandra Chlebowski, Vivien Lake, Caroline Lacoux, Virginie Lespinet‐Fabre, Olivier Bordone, Simon Heeke, Christophe Bontoux, Ellen Heitzer, Klaus Pantel, Paul Hofman   +13 more
wiley   +1 more source

A Hybrid Semi-Automated Workflow for Systematic and Literature Review Processes with Large Language Model Analysis

Future Internet
Systematic reviews (SRs) are a rigorous method for synthesizing empirical evidence to answer specific research questions. However, they are labor-intensive because of their collaborative nature, strict protocols, and typically large number of documents ...
Anjia Ye, Ananda Maiti, Matthew Schmidt, Scott J. Pedersen   +3 more
doaj   +1 more source

Bioinformatic Workflows for Generating Complete Plastid Genome Sequences—An Example from Cabomba (Cabombaceae) in the Context of the Phylogenomic Analysis of the Water-Lily Clade

Life, 2018
The sequencing and comparison of plastid genomes are becoming a standard method in plant genomics, and many researchers are using this approach to infer plant phylogenetic relationships.
Michael Gruenstaeudl, Nico Gerschler, Thomas Borsch   +2 more
doaj   +1 more source

A Rapid Drug Resistance Genotyping Workflow for Mycobacterium tuberculosis, Using Targeted Isothermal Amplification and Nanopore Sequencing

, 2021
Harriet D. Gliddon, Dan Frampton, Vanisha Munsamy, Jude Heaney, Thomas Pataillot-Meakin, Eleni Nastouli, Alexander S. Pym, Adrie J. C. Steyn, Deenan Pillay, Rachel A. McKendry   +9 more
openalex   +1 more source

Standardised workflow for mass spectrometry-based single-cell proteomics data processing and analysis using the scp package [PDF]

, 2023
Samuel Grégoire, Christophe Vanderaa, Sébastien Pyr dit Ruys, Gabriel Mazzucchelli, Christopher Kune, Didier Vertommen, Laurent Gatto   +6 more
openalex   +1 more source

Transcriptional network analysis of PTEN‐protein‐deficient prostate tumors reveals robust stromal reprogramming and signs of senescent paracrine communication

Molecular Oncology, EarlyView.
Combining PTEN protein assessment and transcriptomic profiling of prostate tumors, we uncovered a network enriched in senescence and extracellular matrix (ECM) programs associated with PTEN loss and conserved in a mouse model. We show that PTEN‐deficient cells trigger paracrine remodeling of the surrounding stroma and this information could help ...
Ivana Rondon‐Lorefice, Jose I. Lopez, Aitziber Ugalde‐Olano, Maite Zufiaurre, Ianire Astobiza, Natalia Martin‐Martin, Laura Bozal‐Basterra, Saioa Garcia‐Longarte, Amaia Zabala‐Letona, Sofia Rey, Aida Santos‐Martin, Miguel Unda, Ana Loizaga‐Iriarte, Mariona Graupera, Paolo Nuciforo, Arkaitz Carracedo, Isabel Mendizabal   +16 more
wiley   +1 more source

Next‐generation proteomics improves lung cancer risk prediction

Molecular Oncology, EarlyView.
This is one of very few studies that used prediagnostic blood samples from participants of two large population‐based cohorts. We identified, evaluated, and validated an innovative protein marker model that outperformed an established risk prediction model and criteria employed by low‐dose computed tomography in lung cancer screening trials.
Megha Bhardwaj, Clara Frick, Ben Schöttker, Bernd Holleczek, Hermann Brenner   +4 more
wiley   +1 more source

ERROR HANDLING IN INTEGRATION WORKFLOWS

Научный вестник МГТУ ГА, 2017
Simulation experiments performed while solving multidisciplinary engineering and scientific problems require joint usage of multiple software tools.
A. M. Nazarenko, A. A. Prokhorov
doaj  

Graph neural networks and high throughput quantum chemistry workflows for detailed kinetic modeling [PDF]

, 2021
Sai Krishna Sirumalla
openalex   +1 more source

CyTOF workflow: differential discovery in high-throughput high-dimensional cytometry datasets

F1000Research, 2017
High-dimensional mass and flow cytometry (HDCyto) experiments have become a method of choice for high-throughput interrogation and characterization of cell populations. Here, we present an updated R-based pipeline for differential analyses of HDCyto data,
M. Nowicka, C. Krieg, L. Weber, F. Hartmann, S. Guglietta, B. Becher, M. Levesque, M. Robinson   +7 more
semanticscholar   +1 more source