THE RECONSTRUCTION OF ANCESTRAL CHARACTER STATES [PDF]
The problem of error in the phylogenetic reconstruction of ancestral character states is explored by developing the model of Frumhoff and Reeve (1994). Information about the evolutionary rate of change within a character is inferred from the distribution of its character states on a known phylogeny, and this information is used to impose confidence ...
Ted R, Schultz +2 more
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Understanding phenotypical character evolution in parmelioid lichenized fungi (Parmeliaceae, Ascomycota). [PDF]
Parmelioid lichens form a species-rich group of predominantly foliose and fruticose lichenized fungi encompassing a broad range of morphological and chemical diversity.
Pradeep K Divakar +4 more
doaj +1 more source
Evolution of morphological and climatic adaptations in Veronica L. (Plantaginaceae) [PDF]
Perennials and annuals apply different strategies to adapt to the adverse environment, based on ‘tolerance’ and ‘avoidance’, respectively. To understand lifespan evolution and its impact on plant adaptability, we carried out a comparative study of ...
Jian-Cheng Wang +2 more
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Phylogenetic Relationships and Evolution of the Androecia in Ruteae (Rutaceae). [PDF]
Ruta, which belongs to tribe Ruteae, is the type genus of the subfamily Rutoideae and the family Rutaceae. Molecular systematic studies have shown that the genera in Ruteae are closer related to Aurantioideae than to most other genera of Rutoideae, some ...
Lai Wei +3 more
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The evolution of marine dwelling in Diptera
Marine dwelling in Diptera has been relatively unexplored and the frequency of transitions to the marine environment and the evolutionary history remain poorly understood. By reviewing records from the World Register of Marine Species and using ancestral
Nina Pak, Stephanie Wu, Joel F. Gibson
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Effects of Phylogenetic Signal on Ancestral State Reconstruction [PDF]
One of the standard tools used to understand the processes shaping trait evolution along the branches of a phylogenetic tree is the reconstruction of ancestral states (Pagel 1999). The purpose is to estimate the values of the trait of interest for every internal node of a phylogenetic tree based on the trait values of the extant species, a topology and,
Litsios, Glenn, Salamin, Nicolas
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Bacterial microevolution and the Pangenome [PDF]
The comparison of multiple genome sequences sampled from a bacterial population reveals considerable diversity in both the core and the accessory parts of the pangenome.
A Bankevich +68 more
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Taxonomy, Phylogeny, Molecular Dating and Ancestral State Reconstruction of Xylariomycetidae (Sordariomycetes) [PDF]
Abstract Xylariomycetidae ( Ascomycota ) is a highly diversified group with variable stromatic characters. Our research focused on inconspicuous stromatic xylarialean taxa from China, Italy, Russia, Thailand and the United Kingdom. Detailed morphological descriptions, illustrations and combined ITS-LSU- rpb 2- tub 2- tef 1 phylogenies ...
Milan C. Samarakoon +9 more
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Structures of hyperstable ancestral haloalkane dehalogenases show restricted conformational dynamics
Ancestral sequence reconstruction is a powerful method for inferring ancestors of modern enzymes and for studying structure–function relationships of enzymes.
Petra Babkova +5 more
doaj +1 more source
Investigating the phylogenetic history of toxin tolerance in mushroom‐feeding Drosophila
Understanding how and when key novel adaptations evolved is a central goal of evolutionary biology. Within the immigrans‐tripunctata radiation of Drosophila, many mushroom‐feeding species are tolerant of host toxins, such as cyclopeptides, that are ...
Theresa Erlenbach +7 more
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