Results 31 to 40 of about 276,580 (352)

The endophytic mycobiota of Arabidopsis thaliana

Fungal Diversity, 2012
Fungal endophytes are receiving increasing attention as resources to improve crop production and ecosystem management. However, the biology and ecological significance of these symbionts remains poorly understood, due to a lack of model systems for more efficient research.
García-Martín, Elena, Alonso González, Ángela, Platas, Gonzalo, Sacristán, Soledad   +3 more
openaire   +4 more sources

A high resolution map of the Arabidopsis thaliana developmental transcriptome based on RNA-seq profiling.

The Plant Journal, 2016
Arabidopsis thaliana is a long established model species for plant molecular biology, genetics and genomics, and studies of A. thaliana gene function provide the basis for formulating hypotheses and designing experiments involving other plants, including
A. Klepikova, A. Kasianov, E. Gerasimov, M. Logacheva, A. Penin   +4 more
semanticscholar   +1 more source

Arabidopsis thaliana

, 2014
2.4. Compounds identified in root exudates of A. thaliana 2.4.1. Nucleosides, amino acids and dipeptides Although the established method was not intended to target polar metabolites, several polar aromatic compounds including three nucleosides (1–3), two deoxynucleosides (4, 5), a nucleoside derivative (6) and the aromatic amino acids Phe (7), Tyr (8 ...
Strehmel, Nadine, Böttcher, Christoph, Schmidt, Stephan, Scheel, Dierk   +3 more
openaire   +2 more sources

Evolutionary origins of Brassicaceae specific genes in Arabidopsis thaliana

BMC Evolutionary Biology, 2011
Background All sequenced genomes contain a proportion of lineage-specific genes, which exhibit no sequence similarity to any genes outside the lineage.
Keshavaiah Channa, Donoghue Mark TA, Swamidatta Sandesh H, Spillane Charles   +3 more
doaj   +1 more source

AGRIS: Arabidopsis Gene Regulatory Information Server, an information resource of Arabidopsis cis-regulatory elements and transcription factors

BMC Bioinformatics, 2003
Background The gene regulatory information is hardwired in the promoter regions formed by cis-regulatory elements that bind specific transcription factors (TFs). Hence, establishing the architecture of plant promoters is fundamental to understanding gene
Molina Carlos, Kurtz Mike, Matthews Nicole, Palaniswamy Saranyan K, Sun Hao, Davuluri Ramana V, Grotewold Erich   +6 more
doaj   +1 more source

The regulatory landscape of Arabidopsis thaliana roots at single-cell resolution

Nature Communications, 2021
Existing studies of the chromatin accessibility, the primary mark of regulatory DNA, in Arabidopsis are based mainly on bulk samples. Here, the authors report the regulatory landscape of Arabidopsis thaliana roots at single-cell resolution.
Michael W. Dorrity, Cristina M. Alexandre, Morgan O. Hamm, Anna-Lena Vigil, Stanley Fields, Christine Queitsch, Josh T. Cuperus   +6 more
doaj   +1 more source

Genome-wide analysis of AAAG and ACGT cis-elements in Arabidopsis thaliana reveals their involvement with genes downregulated under jasmonic acid response in an orientation independent manner

G3: Genes, Genomes, Genetics, 2022
Cis-ciscis(N)(N)Arabidopsis thaliana(N)(N)(N)(N)
Zaiba H Khan, Siddhant Dang, Mounil B Memaya, Sneha L Bhadouriya, Swati Agarwal, Sandhya Mehrotra, Divya Gupta, Rajesh Mehrotra   +7 more
doaj   +1 more source

Mining the active proteome of Arabidopsis thaliana [PDF]

Frontiers in Plant Science, 2011
Assigning functions to the >30,000 proteins encoded by the Arabidopsis genome is a challenging task of the Arabidopsis Functional Genomics Network. Although genome-wide technologies like proteomics and transcriptomics have generated a wealth of information that significantly accelerated gene annotation, protein activities are poorly predicted by ...
Van der Hoorn, Renier A.L., Colby, Tom, Nickel, Sabrina, Richau, Kerstin H., Schmidt, Jürgen, Kaiser, Markus   +5 more
openaire   +5 more sources

The Arabidopsis thaliana mobilome and its impact at the species level

eLife, 2016
Transposable elements (TEs) are powerful motors of genome evolution yet a comprehensive assessment of recent transposition activity at the species level is lacking for most organisms.
L. Quadrana, Amanda Bortolini Silveira, G. Mayhew, Chantal LeBlanc, R. Martienssen, J. Jeddeloh, V. Colot   +6 more
semanticscholar   +1 more source

Systematic Profiling of Histone Readers in Arabidopsis thaliana

Cell Reports, 2018
Histone post-translational modifications (PTMs) and their recognition by histone readers exert crucial functions in eukaryotes. Despite extensive studies, conservation and diversity of histone PTM regulation between animals and plants remain less ...
Shuai Zhao, Baichao Zhang, Mo Yang, Jinsong Zhu, Haitao Li   +4 more
doaj   +1 more source