Results 141 to 150 of about 76,623 (339)

MetaPalette: A $k$-mer painting approach for metagenomic taxonomic profiling and quantification of novel strain variation [PDF]

open access: yesarXiv, 2016
Metagenomic profiling is challenging in part because of the highly uneven sampling of the tree of life by genome sequencing projects and the limitations imposed by performing phylogenetic inference at fixed taxonomic ranks. We present the algorithm MetaPalette which uses long $k$-mer sizes ($k=30, 50$) to fit a $k$-mer "palette" of a given sample to ...
arxiv  

Targeting the Tumor Microbiota in Cancer Therapy Basing on Nanomaterials

open access: yesExploration, EarlyView.
Intra‐tumoral microbiota, which is a potential component of the tumor microenvironment, has been emerging as a key participant and driving factor in cancer. This article reviews the latest progress in this field, including the microbial community within tumors and its pro‐cancer mechanisms, as well as the anti‐tumor strategies targeting intra‐tumoral ...
Yanan Niu   +4 more
wiley   +1 more source

Frontiers in soil ecology—Insights from the World Biodiversity Forum 2022

open access: yesJournal of Sustainable Agriculture and Environment, Volume 1, Issue 4, Page 245-261, December 2022., 2022
Abstract Global change is affecting soil biodiversity and functioning across all terrestrial ecosystems. Still, much is unknown about how soil biodiversity and function will change in the future in response to simultaneous alterations in climate and land use, as well as other environmental drivers.
Nico Eisenhauer   +25 more
wiley   +1 more source

Synthetic Biology‐Based Engineering Living Therapeutics for Antimicrobial Application

open access: yesExploration, EarlyView.
This perspective highlights synthetic biology‐driven antibacterial strategies, focusing on three innovative approaches: engineered bacteriophages for precision bacterial targeting, reprogrammed microbes that detect quorum‐sensing signals or metabolites to release antimicrobials, and engineering mammalian cells that recognize pathogen‐associated ...
Shun Huang   +4 more
wiley   +1 more source

Multi-omic stock of surface ocean microbiome built by monthly, weekly and daily sampling in Dapeng Bay, China

open access: yesScientific Data
The coastal ocean is the dynamic interface where terrestrial, atmospheric, and marine systems converge, acting as a hotspot for microbial activity, which underpins the intricate web of carbon and nitrogen cycling.
Yanwei Chen   +10 more
doaj   +1 more source

Berries: Health Effects via Modulation of the Gut Microbiota

open access: yesFood Frontiers, EarlyView.
ABSTRACT Berries are widely regarded as beneficial foods, rich in polyphenols, flavonoids, and other bioactive compounds that could positively influence human health. Although the gut microbiota plays a crucial role in metabolism and physiology of humans, the interaction between berries and human gut microbiota activity remains unclear.
Manjin Xu   +11 more
wiley   +1 more source

Genome‐wide identification and biological relevance of broccoli aquaporins

open access: yesThe Plant Genome, Volume 15, Issue 4, December 2022., 2022
Abstract Broccoli (Brassica oleracea var. italica) is an important crop worldwide, and its regular consumption is associated with health benefits due to the presence of various bioactive compounds. An optimal water balance and homeostasis are needed for plant growth; in this sense, aquaporins play a crucial role.
Juan Nicolas‐Espinosa   +1 more
wiley   +1 more source

Cell cycle characteristics of thermophilic archaea [PDF]

open access: green, 1997
Rolf Bernander, Alicia Poplawski
openalex   +1 more source

A human skin microbiome reference catalog and the skin microbial landscape of plateau adults

open access: yesiMetaOmics, EarlyView.
Understanding the skin microbiome is crucial for elucidating its role in health and disease. However, comprehensive studies on the genetic and functional diversity of the skin microbiome in individuals living in extreme environments remain scarce. This work explores the unique characteristics and functional adaptations of the plateau skin microbiome ...
Yi Liu   +29 more
wiley   +1 more source

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