Results 1 to 10 of about 160,184 (182)

Concatenated 16S rRNA sequence analysis improves bacterial taxonomy. [PDF]

open access: yesF1000Res, 2022
AbstractMicroscopic, biochemical, molecular, and computer-based approaches are extensively used to identify and classify bacterial populations. Further, advances in DNA sequencing and bioinformatics workflows facilitated sophisticated genome-based methods for microbial taxonomy.
Paul B.
europepmc   +3 more sources

Taxonomy of bacterial fish pathogens [PDF]

open access: yesVeterinary Research, 2011
Bacterial taxonomy has progressed from reliance on highly artificial culture-dependent techniques involving the study of phenotype (including morphological, biochemical and physiological data) to the modern applications of molecular biology, most ...
Austin Brian
doaj   +4 more sources

Genomics in Bacterial Taxonomy: Impact on the Genus Pseudomonas. [PDF]

open access: yesGenes (Basel), 2020
The introduction of genomics is profoundly changing current bacterial taxonomy. Phylogenomics provides accurate methods for delineating species and allows us to infer the phylogeny of higher taxonomic ranks as well as those at the subspecies level. We present as a model the currently accepted taxonomy of the genus Pseudomonas and how it can be modified
Lalucat J   +3 more
europepmc   +5 more sources

Oral microbiome as a diagnostic biomarker for pancreatic cancer: a systematic review and meta-analysis of diagnostic accuracy. [PDF]

open access: yesJ Oral Microbiol
Background This systematic review and meta-analysis aim to assess the diagnostic accuracy of the oral microbiome in detecting pancreatic cancer.Methods A comprehensive search of relevant studies was conducted using key terms across multiple databases ...
Koopaie M, Fatahzadeh M, Kolahdooz S.
europepmc   +2 more sources

Microbiome of Sri Lankan Coral Reefs: An Indian Ocean Island Subjected to a Gradient of Natural and Anthropogenic Impacts

open access: yesOceans, 2023
Coral reefs around Sri Lanka have coexisted with human communities for thousands of years and are a continual source of food, economic productivity, and tourism.
Mohamed F. M. Fairoz   +9 more
doaj   +1 more source

Development of qPCR Detection Assay for Potato Pathogen Pectobacterium atrosepticum Based on a Unique Target Sequence

open access: yesPlants, 2021
The recent taxonomic diversification of bacterial genera Pectobacterium and Dickeya, which cause soft rot in plants, focuses attention on the need for improvement of existing methods for the detection and differentiation of these phytopathogens.
Anna A. Lukianova   +6 more
doaj   +1 more source

Relationships among bacterial cell size, diversity, and taxonomy in rumen

open access: yesFrontiers in Microbiology
IntroductionThe rumen microbial community plays a crucial role in the digestion and metabolic processes of ruminants. Although sequencing-based studies have helped reveal the diversity and functions of bacteria in the rumen, their physiological and ...
Sijia Liu   +4 more
doaj   +3 more sources

Unlocking the microbiome communities of Banana (Musa spp.) under disease stressed (Fusarium wilt) and non-stressed conditions [PDF]

open access: yes, 2020
We assessed the diversity, structure, and assemblage of bacterial and fungal communities associated with banana plants with and without Fusarium oxysporum f. sp. cubense (Foc) symptoms.
Kaushal, Manoj   +2 more
core   +1 more source

Phytoplasma Taxonomy: Nomenclature, Classification, and Identification

open access: yesBiology, 2022
Phytoplasmas are pleomorphic, wall-less intracellular bacteria that can cause devastating diseases in a wide variety of plant species. Rapid diagnosis and precise identification of phytoplasmas responsible for emerging plant diseases are crucial to ...
Wei Wei, Yan Zhao
doaj   +1 more source

Functional Taxonomy of Bacterial Hyperstructures [PDF]

open access: yesMicrobiology and Molecular Biology Reviews, 2007
SUMMARYThe levels of organization that exist in bacteria extend from macromolecules to populations. Evidence that there is also a level of organization intermediate between the macromolecule and the bacterial cell is accumulating. This is the level of hyperstructures. Here, we review a variety of spatially extended structures, complexes, and assemblies
Norris, V.   +12 more
openaire   +4 more sources

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