Results 41 to 50 of about 30,427,296 (288)
Report on Pairing-based Cryptography
Journal of Research of the National Institute of Standards and Technology, 2015 This report summarizes study results on pairing-based cryptography. The main purpose of the study is to form NIST's position on standardizing and recommending pairing-based cryptography schemes currently published in research literature and standardized in other standard bodies. The report reviews the mathematical background of pairings.
René Peralta +5 more
openaire +3 more sources
RNAStructViz: graphical base pairing analysis [PDF]
Bioinformatics, 2021 Abstract Summary We present a new graphical tool for RNA secondary structure analysis. The central feature is the ability to visually compare/contrast up to three base pairing configurations for a given sequence in a compact, standardized circular arc diagram layout. This is complemented by a built-in
Maxie Dion Schmidt +2 more
openaire +4 more sources
Biochemistry, 2015 5-Hydroxymethylcytosine (5hmC), 5-formylcytosine (5fC), and 5-carboxylcytosine (5caC) form during active demethylation of 5-methylcytosine (5mC) and are implicated in epigenetic regulation of the genome.
Marta W. Szulik +9 more
semanticscholar +1 more source
Modelling proton tunnelling in the adenine-thymine base pair.
Physical Chemistry, Chemical Physics - PCCP, 2015 The energies of the canonical (standard, amino-keto) and tautomeric (non-standard, imino-enol) charge-neutral forms of the adenine-thymine base pair (A-T and A*-T*, respectively) are calculated using density functional theory.
A. Godbeer, J. Al-Khalili, P. Stevenson
semanticscholar +1 more source
Multi-site H-bridge breathers in a DNA--shaped double strand [PDF]
, 2003 We investigate the formation process of nonlinear vibrational modes representing broad H-bridge multi--site breathers in a DNA--shaped double strand. Within a network model of the double helix we take individual motions of the bases within the base ...
Alvarez A +9 more
core +2 more sources
Dynamic Structure and Stability of DNA Duplexes Bearing a Dinuclear Hg(II)-Mediated Base Pair
Molecules, 2020 Quantum mechanical (QM) and hybrid quantum mechanical/molecular mechanical (QM/MM) molecular dynamics simulations of a recently reported dinuclear mercury(II)-mediated base pair were performed aiming to analyse its intramolecular bonding pattern, its ...
Jim Bachmann +3 more
doaj +1 more source
iScience, 2022 Summary: Base pairs are fundamental building blocks of RNA. The base pairs of low stability are often critical in RNA functions. Here, we develop a solid-state NMR-based water-RNA exchange spectroscopy (WaterREXSY) to characterize RNA in solid.
Sha Zhao +10 more
doaj +1 more source
Theory of phase segregation in DNA assemblies containing two different base pair sequence types [PDF]
, 2016 Spontaneous pairing of homologous DNA sequences – a challenging subject in molecular biophysics, often referred to as ‘homology recognition’ – ha s been observed in vitro for several DNA system s a . One of th e se experiments involved liquid crystalline
Kornyshev, AA, Lee, DJ, Wynveen, A
core +1 more source
Unprecedented dinuclear silver(I)-mediated base pair involving the DNA lesion 1,N(6)-ethenoadenine.
Dalton Transactions, 2015 The DNA lesion 1,N(6)-ethenoadenine (εA) has been investigated with respect to its metal-binding properties. A synthetic DNA duplex comprising an εA : εA mispair readily forms doubly silver(I)-mediated base pairs εA-Ag(I)2-εA, representing the first ...
Soham Mandal, A. Hepp, Jens Müller
semanticscholar +1 more source
Pulling hairpinned polynucleotide chains: Does base-pair stacking interaction matter?
, 2001 Force-induced structural transitions both in relatively random and in designed single-stranded DNA (ssDNA) chains are studied theoretically. At high salt conditions, ssDNA forms compacted hairpin patterns stabilized by base-pairing and base-pair stacking
Haijun Zhou, Moroz J. D., Yang Zhang
core +1 more source