Results 81 to 90 of about 30,427,296 (288)
We have determined the three-dimensional (3D) structure of DNA duplex that includes tandem HgII-mediated T–T base pairs (thymine–HgII–thymine, T–HgII–T) with NMR spectroscopy in solution.
H. Yamaguchi+13 more
semanticscholar +1 more source
Termination Proofs in the Dependency Pair Framework May Induce Multiple Recursive Derivational Complexity [PDF]
We study the derivational complexity of rewrite systems whose termination is provable in the dependency pair framework using the processors for reduction pairs, dependency graphs, or the subterm criterion. We show that the derivational complexity of such
Moser, Georg, Schnabl, Andreas
core +3 more sources
Base pair opening within B-DNA: free energy pathways for GC and AT pairs from umbrella sampling simulations. [PDF]
The conformational pathways and the free energy variations for base opening into the major and minor grooves of a B-DNA duplex are studied using umbrella sampling molecular dynamics simulations. We compare both GC and AT base pair opening within a double-
Giudice, Emmanuel+2 more
core +3 more sources
Reversibly locked thionucleobase pairs in DNA to study base flipping enzymes
Covalently interstrand cross-linked DNA is an interesting tool to study DNA binding proteins that locally open up the DNA duplex by flipping single bases out of the DNA helix or melting whole stretches of base pairs to perform their function.
Christine Beuck, Elmar Weinhold
doaj +1 more source
Introduction: Persian walnut (Juglans regia L.), belonging to the Juglandaceae family, has its natural origin in the mountainous regions of central Asia and especially northern forests of Iran.
Shadi Attar+3 more
doaj +1 more source
Influence of supercoiling on the disruption of dsDNA
We propose that supercoiling energizes double-stranded DNA (dsDNA) so as to facilitate thermal fluctuations to an unzipped state. We support this with a model of two elastic rods coupled via forces that represent base pair interactions.
Binney J. J.+5 more
core +1 more source
A base pair resolution map of nucleosome positions in yeast
The exact positions of nucleosomes along genomic DNA can influence many aspects of chromosome function. However, existing methods for mapping nucleosomes do not provide the necessary single-base-pair accuracy to determine these positions. Here we develop
Kristin Brogaard+3 more
semanticscholar +1 more source
Estimating Exceptionally Rare Germline and Somatic Mutation Frequencies via Next Generation Sequencing. [PDF]
We used targeted next generation deep-sequencing (Safe Sequencing System) to measure ultra-rare de novo mutation frequencies in the human male germline by attaching a unique identifier code to each target DNA molecule. Segments from three different human
Jordan Eboreime+4 more
doaj +1 more source
The Influence of Neighboring Base Pairs upon Base-Pair Substitution Mutation Rates [PDF]
The 2-aminopurine-induced transition, A·T → G·C, was studied at particular sites in bacteriophage T4 as a function of the nearby base-pair composition of the DNA. Changing a base pair changed the transition rate at the adjacent base pair up to 23-fold, and at the next base pair by a lesser amount.
openaire +3 more sources
Significance of authenticity in meat and meat products in Iran
The Authenticity of meat products is very important for religious and health reasons in Iran. According to legislation in Iran, the consumption and importation of pork, horse, donkey and cat products should be banned.
Tahereh Rezazadeh+2 more
doaj