Results 201 to 210 of about 61,598 (309)

VirBinn improves viral genome binning from metagenomic Hi-C through graph diffusion. [PDF]

Bioinformatics
Wang S, Du Y.
europepmc   +1 more source

Multiphoton Quantum Reservoirs For Robust Multidimensional Computing

Advanced Science, EarlyView.
Projective measurements reveal hidden multidimensional quantum networks within classical multiphoton fields, enabling robust quantum reservoirs for room‐temperature quantum simulation, prediction, and information processing. These networks transform noisy classical photonic platforms into scalable quantum computational architectures.
Mingyuan Hong, Mario A. Quiroz‐Juarez, Riley B. Dawkins, Fatemeh Mostafavi, Jannatul Ferdous, Addison Wilberg, Blas M. Rodriguez‐Lara, Justin Woodring, Chenglong You, Roberto de J. León‐Montiel, Omar S. Magaña‐Loaiza   +10 more
wiley   +1 more source

DCVBin: a novel binning method for single-sample metagenomes based on DNA language model and variational autoencoder. [PDF]

Brief Bioinform
Wang J, Liu Y, Liu F, Hou T, Chen S, Liu S, Liu Y.   +6 more
europepmc   +1 more source

STWave: Fine‐Scale Spatial Structure Discovery in Microscopic‐Resolution Spatial Transcriptomics via Patchwise Wavelet Graphs

Advanced Science, EarlyView.
STWave transforms massive microscopic‐resolution spatial transcriptomics into interpretable fine‐scale tissue maps through patch‐wise inference, wavelet‐based multi‐scale encoding, and dual‐domain reconstruction. It reduces noise while preserving weak spatial signals, enabling efficient analysis of 6 40 000 spots of 2.47 GB GPU memory and revealing ...
Tao Jiang, Songming Zhang, Xiaofeng Chen, Xiongtao Xiao, Wenming Cao, Weikai Li, Tong Zhao, Bing Li, Xinyue Xu, Zhongshan Li   +9 more
wiley   +1 more source

A genomic catalog of the mouse gut virome reveals features associated with ageing. [PDF]

Nat Commun
Kim HJ, Kim N, Cha JH, Kim W, Ma J, Kim J, Kim Y, Yang S, Byun S, Lee E, Hemberg M, Lee I.   +11 more
europepmc   +1 more source

Fzd7 Restrains Pink1‐Dependent Mitophagy in Suture Stem Cells to Maintain Cranial Suture Patency

Advanced Science, EarlyView.
How suture stem cells fail to preserve cranial suture patency remains incompletely understood. Integrated single‐cell and high‐resolution spatial transcriptomic analyses identify reduced Fzd7 expression in Prrx1+ suture stem cells as an early feature of craniosynostosis.
Xinyan Chen, Zong Chen, Chenzhi Lai, Yingying Yue, Tian He, Hao Gong, Jing Shi, Xiaoshuang Guo, Yu Wang, Guodong Song, Xiaolei Jin   +10 more
wiley   +1 more source

Clifti-GPT: privacy-preserving federated fine-tuning and transferable inference of foundation models on clinical single-cell data. [PDF]

BioData Min
Bakhtiari M, Elkjaer ML, Can AO, Theis F, Oubounyt M, Baumbach J.   +5 more
europepmc   +1 more source

α‐Synuclein Forms Distinct Micelle‐Like Assemblies at Low Ionic Strengths

Advanced Science, EarlyView.
At high ionic strength, α‐synuclein forms diverse assemblies, including oligomers, fibrils, and condensates. Here, we show that at low ionic strength, α‐synuclein adopts a distinct, low‐abundance assembly state. These assemblies maintain a constant size above a critical concentration and do not coalesce, suggesting a micelle‐like organization ...
Sophie Hertel, Soumik Ray, Federica Saraceno, Giacomo Nisini, Georgia Nasi, Thomas Oliver Mason, Antonin Kunka, Effrosyni Agrimaki, Dannie Juul Olesen, Francesco Simone Ruggeri, Alexander K. Buell   +10 more
wiley   +1 more source

EMORe: Motion-Robust 5D MRI Reconstruction via Expectation-Maximization-Guided Binning Correction and Outlier Rejection. [PDF]

IEEE Trans Med Imaging
Arshad SM, Potter LC, Liu Y, Crabtree C, Tong MS, Ahmad R.   +5 more
europepmc   +1 more source

SynNotch Receptors for Visualizing Immunoreceptor Force Transmission and Downstream Signaling In Vivo

Advanced Science, EarlyView.
A mechanically activated SynNotch reporter platform enables detection of force transmission through receptors as they mediate immune cell interactions. Targeting CD40 on B cells and TCR on T cells records force‐induced reporter activation across 2D coculture, 3D organoid, and implanted in mice, which also reveal force‐amplification of immune receptor ...
Menglan Li, Jintian Lyu, Kaitao Li, Ameya Dravid, Deepali Balasubramani, Amir H. K. Ashkezari, Hyun‐Kyu Choi, Gabriel A. Kwong, Ankur Singh, Cheng Zhu   +9 more
wiley   +1 more source