Results 121 to 130 of about 2,499 (218)

Biocuration: A New Challenge for the Tunicate Community [PDF]

genesis, 2015
SummaryBiocuration, the field of biology concerned with organizing, representing, checking, and making biological information accessible to both humans and computers, has become an essential part of biological and biomedical research. However, curation increasingly lags behind data generation in funding, development, and recognition.
openaire   +2 more sources

One document, many users: what happens when you re-purpose a document? [PDF]

, 2013
To assess global challenges surrounding issues such as climate change and invasive species requires a baseline of historical data. We are fortunate in biodiversity that such data exists in a rich body of literature.
King, David, Lyal, Chris, Morse, David
core  

Digital BioCuration: A Question of Balance [PDF]

Nature Precedings, 2009
AbstractCuration of biomedical data has come to encompass a broad range of activities and considerations, which include the building of digital archives, making decisions on the relative value and longevity of one dataset vs another, editing data records manually, performing or assessing computational processes over very large sets of data, and ...
openaire   +1 more source

Knowledge engineering tools for reasoning with scientific observations and interpretations: a neural connectivity use case

BMC Bioinformatics, 2011
Background We address the goal of curating observations from published experiments in a generalizable form; reasoning over these observations to generate interpretations and then querying this interpreted knowledge to supply the supporting evidence.
Bota Mihail, Hovy Eduard H, Ramakrishnan Cartic, Russ Thomas A, Burns Gully APC   +4 more
doaj   +1 more source

Textpresso Central: a customizable platform for searching, text mining, viewing, and curating biomedical literature

BMC Bioinformatics, 2018
Background The biomedical literature continues to grow at a rapid pace, making the challenge of knowledge retrieval and extraction ever greater. Tools that provide a means to search and mine the full text of literature thus represent an important way by ...
H.-M. Müller, K. M. Van Auken, Y. Li, P. W. Sternberg   +3 more
doaj   +1 more source

OneDep: unified wwPDB system for deposition, biocuration and validation of macromolecular structures in the PDB archive [PDF]

, 2017
Jasmine Young, John Westbrook, Zukang Feng, wwPDB Team, wwPDB Onedep Team, John L. Markley, Haruki Nakamura, Sameer Velankar, S.K. Burley   +8 more
openalex   +1 more source

Dynamic Retrieval Augmented Generation of Ontologies using Artificial Intelligence (DRAGON-AI)

Journal of Biomedical Semantics
Background Ontologies are fundamental components of informatics infrastructure in domains such as biomedical, environmental, and food sciences, representing consensus knowledge in an accurate and computable form.
Sabrina Toro, Anna V. Anagnostopoulos, Susan M. Bello, Kai Blumberg, Rhiannon Cameron, Leigh Carmody, Alexander D. Diehl, Damion M. Dooley, William D. Duncan, Petra Fey, Pascale Gaudet, Nomi L. Harris, Marcin P. Joachimiak, Leila Kiani, Tiago Lubiana, Monica C. Munoz-Torres, Shawn O‘Neil, David Osumi-Sutherland, Aleix Puig-Barbe, Justin T. Reese, Leonore Reiser, Sofia MC. Robb, Troy Ruemping, James Seager, Eric Sid, Ray Stefancsik, Magalie Weber, Valerie Wood, Melissa A. Haendel, Christopher J. Mungall   +29 more
doaj   +1 more source

Using Links to prototype a Database Wiki [PDF]

, 2011
Both relational databases and wikis have strengths that make them attractive for use in collaborative applications. In the last decade, database-backed Web applications have been used extensively to develop valuable shared biological references called ...
Cheney, James, Lindley, Sam, Müller, Heiko   +2 more
core   +1 more source

Current issues in BioCuration 

, 2017
How much does professional curation cost? What is the accuracy of professional curation? Can we replace professional curators with text-mining software or with crowd-sourced curation?
openaire   +1 more source

Referee report. For: Student biocuration projects as a learning environment [version 1; peer review: 1 approved, 1 approved with reservations]

, 2021
Anna Delprato
openalex   +1 more source