Results 41 to 50 of about 1,547 (208)

Phylogenomic insights into the genus Tulipa (Liliaceae): Taxonomy, evolution, and biogeography

American Journal of Botany, EarlyView.
Abstract Premise Tulips are one of the best‐known geophytes, but their taxonomy remains convoluted and their evolutionary history poorly understood. Here, we used plastid genomes to identify some issues with current classification, understand the diversification history of the genus, and identify potential species linked to historical cultivation ...
Brett Wilson, Maarten J. M. Christenhusz, Nathanael Walker‐Hale, Natalya Beshko, Mariyo Boboev, Colin Clubbe, Davron Dekhkonov, Aibek Dolotbakov, Mehmet Firat, Thomas Freeth, Sjaak de Groot, Avni Hajdari, Georgy A. Lazkov, Ormon Sultangaziev, Komiljon S. Tojibaev, Ben J. M. Zonneveld, Kaiyrkul T. Shalpykov, Samuel F. Brockington   +17 more
wiley   +1 more source

Quest for Orthologs in the Era of Biodiversity Genomics

Genome Biology and Evolution
Abstract The era of biodiversity genomics is characterized by large-scale genome sequencing efforts that aim to represent each living taxon with an assembled genome. Generating knowledge from this wealth of data has not kept up with this pace.
Langschied, F, Bordin, N, Cosentino, S, Fuentes-Palacios, D, Glover, N, Hiller, M, Hu, Y, Huerta-Cepas, J, Coelho, LP, Iwasaki, W, Majidian, S, Manzano-Morales, S, Persson, E, Richards, TA, Gabaldón, T, Sonnhammer, E, Thomas, PD, Dessimoz, C, Ebersberger, I   +18 more
openaire   +5 more sources

Genomic descriptors of biodiversity – A review [PDF]

Die Bodenkultur: Journal of Land Management, Food and Environment, 2018
Summary The characterization of livestock genetic diversity has experienced extensive changes with the availability of dense nucleotide markers. Among the various forms of markers, the single nucleotide polymorphisms (SNP) have arguably the largest influence.
openaire   +2 more sources

Expanded application to plant reproductive tissues of a branched DNA probe‐based in situ hybridization method

Applications in Plant Sciences, EarlyView.
Abstract Premise Detecting clear tissue‐ and organ‐specific patterns of gene expression is key to understanding the genetic mechanisms that control plant development. In situ hybridization (ISH) of mRNA is one of the most precise, yet most challenging approaches to gene expression assays.
Brooklyn M. Anaya, Austin T. Nguyen, Kelly K. S. Matsunaga, Lena C. Hileman   +3 more
wiley   +1 more source

Phylogeographic structure in three North American tent caterpillar species (Lepidoptera: Lasiocampidae): Malacosoma americana, M. californica, and M. disstria [PDF]

PeerJ, 2018
While phylogeographic structure has been examined in many North American vertebrate species, insects have received much less attention despite their central ecological roles.
Linda A. Lait, Paul D.N. Hebert
doaj   +2 more sources

Fun‐sized library prep: Miniaturization is a valid method for per‐sample cost reduction in targeted sequencing of angiosperm DNA

Applications in Plant Sciences, EarlyView.
Abstract Premise Genomic analysis of population structure is important for understanding plant genetic diversity among and within populations. A limitation to the broader application of genetics in conservation and related fields is the cost of obtaining large datasets.
Madison R. Bullock, Mohamed Fokar, Rylee D. Creek, Eliot A. Stevens, Matthew G. Johnson   +4 more
wiley   +1 more source

Integrating machine learning, deep learning, and image analysis for seed species classification

Applications in Plant Sciences, EarlyView.
Abstract Premise The growing demand for wildflower seeds in ecological restoration requires reliable species identification, yet current market products often contain heterogeneous species. As seed identification is labor‐intensive and requires advanced botanical knowledge, we evaluated multiple segmentation and classification approaches to determine ...
Jonathan Ashworth, Eloise Barrett, Rebonto Haque, Ben Wildey, Anthony Hall, Felix Shaw, Jose J. De Vega   +6 more
wiley   +1 more source

Molecular methods for differentiating Phragmites australis subspecies and identification of hybrid stands in the Upper Midwestern United States

Applications in Plant Sciences, EarlyView.
Abstract Premise In North America, Phragmites australis (common reed) has drawn a great deal of research attention. Non‐native P. australis subsp. australis is a noxious weed that has locally displaced native P. australis subsp. americanus in some areas.
Nicholas P. Tippery, Daniel J. Larkin, Julia Bohnen, Douglas L. Wendell, Neil O. Anderson, Susan M. Galatowitsch, Marie Abbey, Alan G. Smith, Andrzej K. Noyszewski   +8 more
wiley   +1 more source

Global Genome Biodiversity Network – Infrastructure for genomic research [PDF]

Biodiversity Information Science and Standards, 2018
Genomic research depends upon access to DNA or tissue collected and preserved according to high-quality standards. At present, the collections in most natural history museums do not sufficiently address these standards. In response to these challenges, natural history museums, culture collections, herbaria, botanical gardens and others have started to ...
openaire   +2 more sources

ELIXIR Projects in the area of biodiversity: Biodiversity Genomics Europe (BGE)

, 2023
Presentation of the Biodiversity Genomics Europe (BGE) Project during a Plenary session of the ELIXIR All Hands Meeting in Dublin, June 2023.
Waterhouse, Robert M, The Biodiversity Genomics Europe (BGE) Consortium   +1 more
openaire   +1 more source