Results 21 to 30 of about 33,953 (257)

A proximity biotinylation-based approach to identify protein-E3 ligase interactions induced by PROTACs and molecular glues

open access: yesNature Communications, 2022
Proteolysis-targeting chimaeras (PROTACs) as well as molecular glues such as immunomodulatory drugs (IMiDs) and indisulam are drugs that induce interactions between substrate proteins and an E3 ubiquitin ligases for targeted protein degradation. Here, we
S. Yamanaka   +8 more
semanticscholar   +1 more source

Proximity-Dependent Biotinylation Approaches to Explore the Dynamic Compartmentalized Proteome

open access: yesFrontiers in Molecular Biosciences, 2022
In recent years, proximity-dependent biotinylation approaches, including BioID, APEX, and their derivatives, have been widely used to define the compositions of organelles and other structures in cultured cells and model organisms.
Ugo Dionne, A. Gingras
semanticscholar   +1 more source

Identification and Analysis of the Tegument Protein and Excretory-Secretory Products of the Carcinogenic Liver Fluke Clonorchis sinensis

open access: yesFrontiers in Microbiology, 2020
Liver fluke proteins, including excretory-secretory products (ESPs) and tegument proteins, are critical for the pathogenesis, nutrient metabolism, etiology and immune response of liver cancer. To understand the functions of various proteins in Clonorchis
Yunliang Shi   +10 more
doaj   +1 more source

Streptavidin-Saporin: Converting Biotinylated Materials into Targeted Toxins

open access: yesToxins, 2023
Streptavidin-Saporin can be considered a type of ‘secondary’ targeted toxin. The scientific community has taken advantage of this conjugate in clever and fruitful ways using many kinds of biotinylated targeting agents to send saporin into a cell selected
Leonardo R. Ancheta   +4 more
doaj   +1 more source

Proximity‐dependent biotinylation approaches to study apicomplexan biology

open access: yesMolecular Microbiology, 2021
In the last 10 years, proximity‐dependent biotinylation (PDB) techniques greatly expanded the ability to study protein environments in the living cell that range from specific protein complexes to entire compartments.
Jessica Kimmel   +3 more
semanticscholar   +1 more source

In vivo discovery of RNA proximal proteins via proximity-dependent biotinylation

open access: yesRNA Biology, 2021
RNA molecules function as messenger RNAs (mRNAs) that encode proteins and noncoding transcripts that serve as adaptor molecules, structural components, and regulators of genome organization and gene expression.
Xianzhi Lin   +4 more
semanticscholar   +1 more source

Proximity Dependent Biotinylation: Key Enzymes and Adaptation to Proteomics Approaches*

open access: yesMolecular & Cellular Proteomics, 2020
Proximity-dependent biotinylation approaches such as BioID and APEX overcome classical limitations of biochemical purification and have gained widespread use in recent years for revealing cellular neighborhoods.
Payman Samavarchi-Tehrani   +2 more
semanticscholar   +1 more source

Thiol-Cleavable Biotin for Chemical and Enzymatic Biotinylation and Its Application to Mitochondrial TurboID Proteomics.

open access: yesJournal of the American Society for Mass Spectrometry, 2021
Protein biotinylation via chemical or enzymatic reactions is often coupled with streptavidin-based enrichment and on-bead digestion in numerous biological applications.
Haorong Li   +4 more
semanticscholar   +1 more source

Biotinylated Cyclooligosaccharides for Paclitaxel Solubilization [PDF]

open access: yesMolecules, 2018
The poor water solubility of paclitaxel causes significant problems in producing cancer therapeutic formulations. Here, we aimed to solubilize paclitaxel using biocompatible cyclic carbohydrates. Generally recognized as safe, labeled β-cyclodextrin (β-CD), a cyclic α-1,4-glucan consisting of seven glucoses, was prepared, and bio-sourced ...
Seunho Jung, Eunae Cho
openaire   +2 more sources

A Comprehensive Analysis of Northern versus Liquid Hybridization Assays for mRNAs, Small RNAs, and miRNAs Using a Non-Radiolabeled Approach

open access: yesCurrent Issues in Molecular Biology, 2021
Northern blotting (NB), a gold standard for RNA detection, has lost its charm due to its hands-on nature, need for good quality RNA, and radioactivity.
Waqar Ahmad   +3 more
doaj   +1 more source

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