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GlycoCT—a unifying sequence format for carbohydrates

Carbohydrate Research, 2008
As part of the EUROCarbDB project (www.eurocarbdb.org) we have carefully analyzed the encoding capabilities of all existing carbohydrate sequence formats and the content of publically available structure databases. We have found that none of the existing structural encoding schemata are capable of coping with the full complexity to be expected for ...
S, Herget   +3 more
openaire   +2 more sources

Carbohydrate storage in anaerobic sequencing batch reactors

Water Research, 2007
This study demonstrates the accumulation and degradation of trehalose as a storage compound in a glucose-fed anaerobic sequencing batch reactor (ASBR). One hour after substrate addition, only 40% of the added organic matter (as chemical oxygen demand, COD) was accounted for by the cumulative methane production and soluble COD remaining in the reactor ...
Toshio, Shimada   +3 more
openaire   +2 more sources

Carbohydrate-Lectin Recognition of Sequence-Defined Heteromultivalent Glycooligomers

Journal of the American Chemical Society, 2014
Multivalency as a key principle in nature has been successfully adopted for the design and synthesis of artificial glycoligands by attaching multiple copies of monosaccharides to a synthetic scaffold. Besides their potential in various applied areas, e.g.
Ponader, D.   +9 more
openaire   +4 more sources

Fluorophore-assisted carbohydrate electrophoresis in the separation, analysis, and sequencing of carbohydrates

Journal of Chromatography A, 1996
Carbohydrate analysis has traditionally been viewed as a specialty science, performed only in a few well-established laboratories using conventional carbohydrate analysis technology (e.g. NMR, gas chromatography-mass spectroscopy, high-performance liquid chromatography, capillary electrophoresis) combined with the specialized technical training that ...
C M, Starr   +4 more
openaire   +2 more sources

Carbohydrate-active enzymes: sequences, shapes, contortions and cells

Biochemical Society Transactions, 2016
The enzyme-catalysed degradation of oligo and polysaccharides is of considerable interest in many fields ranging from the fundamental–understanding the intrinsic chemical beauty–through to the applied, including diverse practical applications in medicine and biotechnology.
Gideon J, Davies, Spencer J, Williams
openaire   +2 more sources

Sequencing for carbohydrates

Nature Methods, 2017
A technique combining mass spectrometry and infrared spectroscopy shows promise for unambiguous sequencing of linear oligosaccharides.
openaire   +1 more source

Primary sequence analysis and representation techniques in carbohydrates

Bioinformatics, 1993
Sequence similarity calculations of carbohydrates present several problems which must be addressed if a computer implementation is to be achieved. These problems range from the computational representation of the complex carbohydrate structure to the method by which the comparison of residue and linkage is to be made. This paper therefore discusses the
S J, Taylor   +4 more
openaire   +2 more sources

Mass spectrometry for structural elucidation and sequencing of carbohydrates

TrAC Trends in Analytical Chemistry, 2021
Abstract Carbohydrates are the most abundant organic compounds in nature, widely distributed in animals, plants and microorganisms. In order to understanding their structure properties, the following critical aspects should be revealed: a) building blocks (compositional monosaccharide); b) glycosidic linkages and anomeric configuration; c) sequence ...
Junqiao Wang   +4 more
openaire   +1 more source

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