Results 21 to 30 of about 777,399 (277)

Reaction Network Viewer (ReNView): An open-source framework for reaction path visualization of chemical reaction systems

open access: yesSoftwareX, 2020
Reaction Path Analysis (RPA) is an essential tool in identifying the key reaction pathways that drive chemical transformations of complex reaction networks.
Udit Gupta, Dionisios G. Vlachos
doaj   +1 more source

Asymptotology of chemical reaction networks [PDF]

open access: yesChemical Engineering Science, 2010
23 pages, 8 figures, 84 refs, Corrected Journal ...
Gorban, Alexander   +2 more
openaire   +4 more sources

Image Semantic Recognition Algorithm of Colorimetric Sensor Array Based on Deep Convolutional Neural Network

open access: yesAdvances in Multimedia, 2022
The inspection of some substances usually includes two levels. One is the detection of the physical properties of the substance, which can be carried out through a series of physical detection methods and corresponding physical experiments.
Xihua Chen, Xing Yang
doaj   +1 more source

Leaderless Deterministic Chemical Reaction Networks [PDF]

open access: yesNatural Computing, 2013
This paper answers an open question of Chen, Doty, and Soloveichik [1], who showed that a function f:N^k --> N^l is deterministically computable by a stochastic chemical reaction network (CRN) if and only if the graph of f is a semilinear subset of N^{k+l}.
Doty, David, Hajiaghayi, Monir
openaire   +4 more sources

CompRet: a comprehensive recommendation framework for chemical synthesis planning with algorithmic enumeration

open access: yesJournal of Cheminformatics, 2020
In computer-assisted synthesis planning (CASP) programs, providing as many chemical synthetic routes as possible is essential for considering optimal and alternative routes in a chemical reaction network.
Ryosuke Shibukawa   +7 more
doaj   +1 more source

Delay Line as a Chemical Reaction Network [PDF]

open access: yes, 2015
Chemistry as an unconventional computing medium presently lacks a systematic approach to gather, store, and sort data over time. To build more complicated systems in chemistries, the ability to look at data in the past would be a valuable tool to perform
Banda, Peter   +2 more
core   +3 more sources

Families of toric chemical reaction networks [PDF]

open access: yesJournal of Mathematical Chemistry, 2020
AbstractWe study families of chemical reaction networks whose positive steady states are toric, and therefore can be parameterized by monomials. Families are constructed algorithmically from a core network; we show that if a family member is multistationary, then so are all subsequent networks in the family.
Michael F. Adamer, Martin Helmer
openaire   +3 more sources

A network dynamics approach to chemical reaction networks [PDF]

open access: yes, 2015
A crisp survey is given of chemical reaction networks from the perspective of general nonlinear network dynamics, in particular of consensus dynamics. It is shown how by starting from the complex-balanced assumption the reaction dynamics governed by mass
Jayawardhana, Bayu   +2 more
core   +2 more sources

The Exploration of Chemical Reaction Networks [PDF]

open access: yesAnnual Review of Physical Chemistry, 2020
Modern computational chemistry has reached a stage at which massive exploration into chemical reaction space with unprecedented resolution with respect to the number of potentially relevant molecular structures has become possible. Various algorithmic advances have shown that such structural screenings must and can be automated and routinely carried ...
Unsleber, Jan P., Reiher, Markus
openaire   +3 more sources

A new class of highly efficient exact stochastic simulation algorithms for chemical reaction networks [PDF]

open access: yes, 2009
We introduce an alternative formulation of the exact stochastic simulation algorithm (SSA) for sampling trajectories of the chemical master equation for a well-stirred system of coupled chemical reactions.
Ivo F. Sbalzarini   +3 more
core   +1 more source

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