Results 31 to 40 of about 777,399 (277)
Programmability of Chemical Reaction Networks [PDF]
, 2009 Motivated by the intriguing complexity of biochemical circuitry within individual cells we study Stochastic Chemical Reaction Networks (SCRNs), a formal model that considers a set of chemical reactions acting on a finite number of molecules in a well-stirred solution according to standard chemical kinetics equations.
Cook, Matthew +3 more
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MethodsX, 2023 Homochirality, the phenomenon by which one of two virtually identical (non-superimposable mirror images) compounds is favored over the other in the chemistry of life, has been regarded as a requisite for the emergence of all living things on earth ...
Elkin Cruz +2 more
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Determining Interconnections in Chemical Reaction Networks [PDF]
2007 American Control Conference, 2007 We present a methodology for robust determination of chemical reaction network interconnections. Given time series data that are collected from experiments and taking into account the measurement error, we minimize the 1-norm of the decision variables (reaction rates) keeping the data in close Euler-flt with a general model structure based on mass ...
Papachristodoulou, A, Recht, B, IEEE
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Synchronization of Chemical Reaction Networks Based on DNA Strand Displacement Circuits
IEEE Access, 2018 Reversible bimolecular chemical reactions are elementary chemical reactions. This paper investigated this reaction type based on DNA strand displacement, and proposed degradation, catalysis, and annihilation reactions along with the synchronization ...
Chengye Zou +3 more
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Grip on complexity in chemical reaction networks
Beilstein Journal of Organic Chemistry, 2017 A new discipline of “systems chemistry” is emerging, which aims to capture the complexity observed in natural systems within a synthetic chemical framework.
Albert S. Y. Wong, Wilhelm T. S. Huck
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Switching Dynamics in Reaction Networks Induced by Molecular Discreteness [PDF]
, 2006 To study the fluctuations and dynamics in chemical reaction processes, stochastic differential equations based on the rate equation involving chemical concentrations are often adopted. When the number of molecules is very small, however, the discreteness
Gibson M A +7 more
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Linear conjugacy of chemical reaction networks [PDF]
Journal of Mathematical Chemistry, 2011 26 ...
Johnston, Matthew D., Siegel, David
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Comparison Theorems for Stochastic Chemical Reaction Networks [PDF]
Bulletin of Mathematical Biology, 2023 AbstractContinuous-time Markov chains are frequently used as stochastic models for chemical reaction networks, especially in the growing field of systems biology. A fundamental problem for these Stochastic Chemical Reaction Networks (SCRNs) is to understand the dependence of the stochastic behavior of these systems on the chemical reaction rate ...
Felipe A. Campos +4 more
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The GRETOBAPE Gas-phase Reaction Network: The Importance of Being Exothermic
The Astrophysical Journal Supplement Series, 2023 The gas-phase reaction networks are the backbone of astrochemical models. However, due to their complexity and nonlinear impact on the astrochemical modeling, they can be the first source of error in the simulations if incorrect reactions are present ...
Lorenzo Tinacci +7 more
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Journal of Cheminformatics, 2023 In recent years, it has been seen that artificial intelligence (AI) starts to bring revolutionary changes to chemical synthesis. However, the lack of suitable ways of representing chemical reactions and the scarceness of reaction data has limited the ...
Baiqing Li +8 more
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