Overriding Bioprocess Perturbations With a Cell-Machine Interface for Reliable Microbial Stress-Response Control. [PDF]
Microb BiotechnolThe environmental perturbations imposed by the cell–machine interface dominate over mixing‐induced heterogeneities and drive cell population homogeneity. ABSTRACT Controlling cell population dynamics and phenotypic diversification is a key objective in systems and synthetic biology, particularly for ensuring uniform responses from engineered gene ...
Delvenne M +6 more
europepmc +2 more sources
Mathematical Modelling and Intuition in Microbiology: A Perspective. [PDF]
Environ MicrobiolMathematical modelling in microbiology converts verbal reasoning into internally consistent hypotheses that can provide testable predictions, infer hidden parameters, and generate transferable intuition. By selecting an appropriate level of description, researchers can connect data to explanatory principles.
Lopez JA, Erez A.
europepmc +2 more sources
Stable coexistence and phenol-degradation expression of Cupriavidus sp. strain P-10 and Comamonas thiooxydans strain R2 in phenol-competitive chemostat culture [PDF]
Applied Microbiology and BiotechnologyWe investigated the mechanism underlying the coexistence of the phenol-degrading bacteria Cupriavidus sp. strain P-10 and Comamonas thiooxydans strain R2 using a chemostat culture supplemented with phenol as the sole carbon and energy source ...
Kenshi Suzuki +6 more
doaj +2 more sources
A RBA model for the chemostat modeling [PDF]
2019 IEEE 58th Conference on Decision and Control (CDC), 2019 Extended version of conference paper to appear in Conference on Decision and Control ...
Dinh, Marc, Fromion, Vincent
openaire +7 more sources
Metabolic fluxes for nutritional flexibility of Mycobacterium tuberculosis [PDF]
Molecular Systems Biology, 2021 The co‐catabolism of multiple host‐derived carbon substrates is required by Mycobacterium tuberculosis (Mtb) to successfully sustain a tuberculosis infection. However, the metabolic plasticity of this pathogen and the complexity of the metabolic networks
Khushboo Borah +15 more
doaj +2 more sources
A Rosenzweig-MacArthur (1963) Criterion for the Chemostat [PDF]
The Scientific World Journal, 2016 The Rosenzweig-MacArthur (1963) criterion is a graphical criterion that has been widely used for elucidating the local stability properties of the Gause (1934) type predator-prey systems.
Torsten Lindström, Yuanji Cheng
doaj +2 more sources
Riboflavin Production by Steady-State Continuous Cultures of Hyphopichia wangnamkhiaoensis in a Bubble Column Bioreactor [PDF]
MicroorganismsRiboflavin is biosynthesized and excreted extracellularly by the novel yeast Hyphopichia wangnamkhiaoensis. The steady-state kinetics of cell growth, substrate consumption, and riboflavin production by H.
Raziel Arturo Jiménez-Nava +2 more
doaj +2 more sources
, 2018 Raw data files of Shewanella oneidensis MR-1<strong>Tilt Series Date:</strong> 2018-05-22</p> <strong>Data Taken By:</strong> Mohammed Kaplan</p> <strong>Species / Specimen:</strong> Shewanella oneidensis ...
Kaplan, Mohammed
core +9 more sources
Chances and drawbacks of derepressed recombinant enzyme production in continuous cultivations with Komagataella phaffii [PDF]
Frontiers in Bioengineering and BiotechnologyUtilizing Komagataella phaffii (K. phaffii) as a host, methanol-dependent fed-batch cultivations remain state-of-the-art for recombinant protein production.
Mihail Besleaga +4 more
doaj +2 more sources
Competitive exclusion and coexistence in a stoichiometric chemostat model
, 2022 In this paper, we incorporate stoichiometry into a competition model in chemostat culture. We first discuss the dynamics of this stoichiometric chemostat model for single algae species.
Ji, Juping, Wang, Hao
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