Testing robustness of relative complexity measure method constructing robust phylogenetic trees for Galanthus L. Using the relative complexity measure [PDF]
, 2013 Background: Most phylogeny analysis methods based on molecular sequences use multiple alignment where the quality of the alignment, which is dependent on the alignment parameters, determines the accuracy of the resulting trees.
Bakis, Yasin +11 more
core +2 more sources
Interspecific chloroplast genome sequence diversity and genomic resources in Diospyros
BMC Plant Biology, 2018 Background Fruits of persimmon plants are traditional healthy food in China, Korea and Japan. However, due to the shortage of morphological and DNA markers, the development of persimmon industry has been heavily inhibited.
Wenqing Li +8 more
doaj +1 more source
Next generation sequencing reveals the complete plastome sequence of newly discovered cliff-dwelling Sonchus boulosii (Asteraceae: Cichorieae) in Morocco [PDF]
, 2019 The complete chloroplast genome sequences of newly discovered cliff-dwelling species of Sonchus, S. boulosii, were reported in this study. The S. boulosii plastome was 152,016 bp long, with the large single copy (LSC) region of 83,988 bp, the small ...
Kim, Seon-Hee +2 more
core +1 more source
Seven-Cluster Structure of Larch Chloroplast Genome [PDF]
Журнал Сибирского федерального университета: Серия Биология, 2015 The paper presents a novel approach to study a nucleotide sequence structure with respect to the chloroplast genome DNA sequence analysis. A specific frequencies distribution pattern of the consecutive triple nucleotide fragments was identified in the ...
Michael G. Sadovsky +5 more
doaj +1 more source
Analysis of DNA profiles of ash (Fraxinus excelsior L.) to provide evidence of illegal logging [PDF]
, 2017 The present work formed part of a research project supported by the General Directorate of State Forests (Grants BLP-333 and BLP-384). We gratefully acknowledge the Forest Guard staff from Śnieżka Forest District for their efficient cooperation.
Borys, Malgorzata +4 more
core +2 more sources
Reciprocal regulation of protein synthesis and carbon metabolism for thylakoid membrane biogenesis [PDF]
, 2013 Metabolic control of gene expression coordinates the levels of specific gene products to meet cellular demand for their activities. This control can be exerted by metabolites acting as regulatory signals and/or a class of metabolic enzymes with dual ...
Bohne, Alexandra-Viola +6 more
core +3 more sources
Organellar genome assembly methods and comparative analysis of horticultural plants
Horticulture Research, 2018 Genetics: Innovative DNA assembly method for mitochondrial and chloroplast genomes A new method makes it easier to assemble the DNA sequences of mitochondrial and chloroplast genomes for horticultural plants. Most strategies for assembling the genomes of
Xuelin Wang +9 more
doaj +1 more source
Dual roles for CND1 in maintenance of nuclear and chloroplast genome stability in plants
Cell Reports, 2023 Summary: The coordination of chloroplast and nuclear genome status is critical for plant cell function. Here, we report that Arabidopsis CHLOROPLAST AND NUCLEUS DUAL-LOCALIZED PROTEIN 1 (CND1) maintains genome stability in the chloroplast and the nucleus.
Hong-Lei Jin +11 more
doaj +1 more source
Phylogenetics of Cucumis (Cucurbitaceae) [PDF]
, 2007 Background: Melon, Cucumis melo, and cucumber, C. sativus, are among the most widely cultivated crops worldwide. Cucumis, as traditionally conceived, is geographically centered in Africa, with C. sativus and C.
Kocyan, Alexander +2 more
core +1 more source
Mitochondrial DNA. Part B. Resources, 2018 We determined the complete chloroplast DNA sequence of Artemisia hallaisanensis Nakai, an endemic herbal species distributed on Jeju Island, Korea. The chloroplast DNA is 151,015 bp in length and encodes 4 rRNA, 30 tRNA, and 80 protein-coding genes ...
Chae Eun Lim +4 more
doaj +1 more source