Results 21 to 30 of about 71,604 (263)

Isolation and analysis of high quality nuclear DNA with reduced organellar DNA for plant genome sequencing and resequencing

BMC Biotechnology, 2011
Background High throughput sequencing (HTS) technologies have revolutionized the field of genomics by drastically reducing the cost of sequencing, making it feasible for individual labs to sequence or resequence plant genomes.
Zdepski Anna, Wang Wenqin, Lutz Kerry A, Michael Todd P   +3 more
doaj   +1 more source

A Simple Method for Isolating Chloroplast DNA and Mitochondria DNA from the Same Rapeseed Green Leaf Tissue

Journal of Integrative Agriculture, 2012
In the study, we present a fast, simple and inexpensive protocol for isolating chloroplast and mitochondrial DNA from one rapeseed leaf tissue sample.
Zhi-yong HU, Gao-miao ZHAN, Han-zhong WANG, Wei HUA   +3 more
doaj   +1 more source

Interspecific chloroplast genome sequence diversity and genomic resources in Diospyros

BMC Plant Biology, 2018
Background Fruits of persimmon plants are traditional healthy food in China, Korea and Japan. However, due to the shortage of morphological and DNA markers, the development of persimmon industry has been heavily inhibited.
Wenqing Li, Yanlei Liu, Yong Yang, Xiaoman Xie, Yizeng Lu, Zhirong Yang, Xiaobai Jin, Wenpan Dong, Zhili Suo   +8 more
doaj   +1 more source

Seven-Cluster Structure of Larch Chloroplast Genome [PDF]

Журнал Сибирского федерального университета: Серия Биология, 2015
The paper presents a novel approach to study a nucleotide sequence structure with respect to the chloroplast genome DNA sequence analysis. A specific frequencies distribution pattern of the consecutive triple nucleotide fragments was identified in the ...
Michael G. Sadovsky, Eugenia I. Bondar, Yulia A. Putintseva, Natalia V. Oreshkova, Eugene A. Vaganov, Konstantin V. Krutovsky   +5 more
doaj   +1 more source

Organellar genome assembly methods and comparative analysis of horticultural plants

Horticulture Research, 2018
Genetics: Innovative DNA assembly method for mitochondrial and chloroplast genomes A new method makes it easier to assemble the DNA sequences of mitochondrial and chloroplast genomes for horticultural plants. Most strategies for assembling the genomes of
Xuelin Wang, Feng Cheng, Dekai Rohlsen, Changwei Bi, Chunyan Wang, Yiqing Xu, Suyun Wei, Qiaolin Ye, Tongming Yin, Ning Ye   +9 more
doaj   +1 more source

Dual roles for CND1 in maintenance of nuclear and chloroplast genome stability in plants

Cell Reports, 2023
Summary: The coordination of chloroplast and nuclear genome status is critical for plant cell function. Here, we report that Arabidopsis CHLOROPLAST AND NUCLEUS DUAL-LOCALIZED PROTEIN 1 (CND1) maintains genome stability in the chloroplast and the nucleus.
Hong-Lei Jin, Sujuan Duan, Pengxiang Zhang, Ziyue Yang, Yunping Zeng, Ziqi Chen, Liu Hong, Mengshu Li, Lujun Luo, Zhenyi Chang, Jiliang Hu, Hong-Bin Wang   +11 more
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The complete chloroplast genome of Artemisia hallaisanensis Nakai (Asteraceae), an endemic medicinal herb in Korea

Mitochondrial DNA. Part B. Resources, 2018
We determined the complete chloroplast DNA sequence of Artemisia hallaisanensis Nakai, an endemic herbal species distributed on Jeju Island, Korea. The chloroplast DNA is 151,015 bp in length and encodes 4 rRNA, 30 tRNA, and 80 protein-coding genes ...
Chae Eun Lim, Goon-Bo Kim, Se-A Ryu, Hee-Ju Yu, Jeong-Hwan Mun   +4 more
doaj   +1 more source

Chloroplast-specific universal primers and their uses in plant studies

Biologia Plantarum, 2011
Universal (consensus) primers are those primers that have the ability to amplify the targeted region of DNA across a broad range of individuals in a certain group of organisms. In plants, such universal primers have been designed to target regions in the
N. Haider
doaj   +1 more source

The chloroplast protein HCF164 is predicted to be associated with Coffea SH9 resistance factor against Hemileia vastatrix

Scientific Reports, 2023
To explore the connection between chloroplast and coffee resistance factors, designated as SH1 to SH9, whole genomic DNA of 42 coffee genotypes was sequenced, and entire chloroplast genomes were de novo assembled.
Leonor Guerra-Guimarães, Carla Pinheiro, Ana Sofia F. Oliveira, Andrea Mira-Jover, Javier Valverde, Fernanda A. de F. Guedes, Herlander Azevedo, Vitor Várzea, Antonio Jesús Muñoz Pajares   +8 more
doaj   +1 more source

An Insight Into the Mechanism of Plant Organelle Genome Maintenance and Implications of Organelle Genome in Crop Improvement: An Update

Frontiers in Cell and Developmental Biology, 2021
Besides the nuclear genome, plants possess two small extra chromosomal genomes in mitochondria and chloroplast, respectively, which contribute a small fraction of the organelles’ proteome.
Kalyan Mahapatra, Samrat Banerjee, Sayanti De, Mehali Mitra, Pinaki Roy, Sujit Roy   +5 more
doaj   +1 more source