Results 21 to 30 of about 1,111,299 (380)

A Comparison of Rice Chloroplast Genomes   [PDF]

Plant Physiology, 2004
Abstract Using high quality sequence reads extracted from our whole genome shotgun repository, we assembled two chloroplast genome sequences from two rice (Oryza sativa) varieties, one from 93-11 (a typical indica variety) and the other from PA64S (an indica-like variety with maternal origin of japonica), which are both parental ...
Tang, Jiabin, Xia, Hong'ai, Cao, Mengliang, Zhang, Xiuqing, Zeng, Wanyong, Hu, Songnian, Tong, Wei, Wang, Jun, Wang, Jian, Yu, Jun, Yang, Huanming, Zhu, Lihuang   +11 more
openaire   +4 more sources

Chloroplast envelope protein encoded by chloroplast genome [PDF]

FEBS Letters, 1993
The gene product of an open reading frame of chloroplast genome, ORF 231 in pea, was immunochemically detected in chloroplast and etioplast envelopes. This is the first protein of a Chloroplast Envelope Membrane encoded by a chloroplast genome. It was named CEM A and the gene, cem A.
Yukiko Sasaki, Kazumasa Sekiguchi, Ryuichi Matsuno, Yukio Nagano   +3 more
openaire   +2 more sources

Complete chloroplast genome of novel Adinandra megaphylla Hu species: molecular structure, comparative and phylogenetic analysis

Scientific Reports, 2021
Adrinandra megaphylla Hu is a medicinal plant belonging to the Adrinandra genus, which is well-known for its potential health benefits due to its bioactive compounds. This study aimed to assemble and annotate the chloroplast genome of A.
Huu Quan Nguyen, T. Nguyen, Thi Nhung Doan, Thi Thu Nga Nguyen, Mai Huong Pham, T. L. Le, Danh Thuong Sy, H. H. Chu, H. Chu   +8 more
semanticscholar   +1 more source

ChloroplastDB: the Chloroplast Genome Database [PDF]

Nucleic Acids Research, 2006
The Chloroplast Genome Database (ChloroplastDB) is an interactive, web-based database for fully sequenced plastid genomes, containing genomic, protein, DNA and RNA sequences, gene locations, RNA-editing sites, putative protein families and alignments (http://chloroplast.cbio.psu.edu/).
Narayanan Veeraraghavan, Izabela Makalowska, Jim Leebens-Mack, Liying Cui, Robert K. Jansen, P. Kerr Wall, Alexander Richter, Claude W. dePamphilis   +7 more
openaire   +2 more sources

Chloroplast genome variation and phylogenetic relationships of Atractylodes species

BMC Genomics, 2020
Atractylodes DC is the basic original plant of the widely used herbal medicines “Baizhu” and “Cangzhu” and an endemic genus in East Asia. Species within the genus have minor morphological differences, and the universal DNA barcodes cannot clearly ...
Yiheng Wang, Sheng Wang, Yanlei Liu, Qingjun Yuan, Jiahui Sun, Lanping Guo   +5 more
semanticscholar   +1 more source

Characterization of the complete chloroplast genome of Populus deltoides Zhonglin 2025

Mitochondrial DNA. Part B. Resources, 2020
The complete chloroplast genome of Populus deltoides was characterized by reference-based assembly using whole-genome sequencing data. The total chloroplast genome size of Populus deltoides included a pair of inverted repeat regions (IRs) of 27,649 bp ...
Weibing Zhuang, Xiaochun Shu, Ming Zhang, Tao Wang, Fengjiao Zhang, Ning Wang, Zhong Wang   +6 more
doaj   +1 more source

Phylogenic study of Lemnoideae (duckweeds) through complete chloroplast genomes for eight accessions [PDF]

PeerJ, 2017
Background Phylogenetic relationship within different genera of Lemnoideae, a kind of small aquatic monocotyledonous plants, was not well resolved, using either morphological characters or traditional markers.
Yanqiang Ding, Yang Fang, Ling Guo, Zhidan Li, Kaize He, Yun Zhao, Hai Zhao   +6 more
doaj   +2 more sources

Organellar inheritance in the green lineage: insights from Ostreococcus tauri [PDF]

, 2013
Along the green lineage (Chlorophyta and Streptophyta), mitochondria and chloroplast are mainly uniparentally transmitted and their evolution is thus clonal. The mode of organellar inheritance in their ancestor is less certain.
Adam Eyre-Walker, Baur, Birky, Bonen, Boynton, Bruen, Correns, De Clerck, Derelle, Duret, Grimsley, Guindon, Gwenael Piganeau, Hasegawa, Hill, Hill, Houliston, Hua, Huang, Hurst, Hutson, Jancek, Kurtz, Larkin, Lewis, Lewontin, Li, MacAlpine, Marin, Marshall, Maréchal, Maynard Smith, McVean, Miyamura, Muller, Nei, Ness, Olson, Piganeau, Posada, Posada, R Development Core Team, Robbens, Rodríguez-Ezpeleta, Romain Blanc-Mathieu, Sager, Sager, Sager, Simpson, Sophie Sanchez-Ferandin, Städler, Sun, Sung, Swofford, Tamura, Tamura, Tsai   +56 more
core   +1 more source

Phylogeny of Prokaryotes and Chloroplasts Revealed by a Simple Composition Approach on All Protein Sequences from Complete Genomes Without Sequence Alignment [PDF]

, 2005
The complete genomes of living organisms have provided much information on their phylogenetic relationships. Similarly, the complete genomes of chloroplasts have helped to resolve the evolution of this organelle in photosynthetic eukaryotes.
C Lemieux, CR Woese, CR Woese, D Sankoff, DH Moreira, E Chatton, E Mayr, E Pennisi, F Tekaia, FitchWM, GI McFadden, GI McFadden, GW Stuart, GW Stuart, J Adachi, J Las Rivas De, J Lin, J Qi, J Qi, J.Q. Deng, JA Eisen, JD Palmer, JR Brown, K.H. Chu, KH Chu, L.Q. Zhou, M Li, M Turmel, M Turmel, MA Ragan, MW Gray, MW Gray, N Saitou, O Weiss, RF Doolittle, RF Doolittle, RL Charlebois, RS Gupta, S.C. Long, ST Fitz-Gibbon, SV Edwards, V.V. Anh, VL Stirewalt, W Martin, W Martin, W Martin, Z.G. Yu, ZG Yu, ZG Yu, ZG Yu, ZG Yu   +50 more
core   +3 more sources

Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae

Frontiers in Plant Science, 2017
Chloroplast genomes of plants are highly conserved in both gene order and gene content. Analysis of the whole chloroplast genome is known to provide much more informative DNA sites and thus generates high resolution for plant phylogenies. Here, we report
Yuan Huang, Yuan Huang, Jun Wang, Yongping Yang, Chuanzhu Fan, Jiahui Chen, Jiahui Chen   +6 more
doaj   +1 more source