Results 21 to 30 of about 1,154,112 (384)

Evolution of the chloroplast genome [PDF]

Philosophical Transactions of the Royal Society of London. Series B: Biological Sciences, 2003
We discuss the suggestion that differences in the nucleotide composition between plastid and nuclear genomes may provide a selective advantage in the transposition of genes from plastid to nucleus. We show that in the adenine, thymine (AT)–rich genome of Borrelia burgdorferi several genes have an AT–content lower ...
Christopher J, Howe, Adrian C, Barbrook, V Lila, Koumandou, R Ellen R, Nisbet, Hamish A, Symington, Tom F, Wightman   +5 more
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Revisiting chloroplast genomic landscape and annotation towards comparative chloroplast genomes of Rhamnaceae

BMC Plant Biology, 2023
AbstractBackgroundMassive parallel sequencing technologies have enabled the elucidation of plant phylogenetic relationships from chloroplast genomes at a high pace. These include members of the family Rhamnaceae. The current Rhamnaceae phylogenetic tree is from 13 out of 24 Rhamnaceae chloroplast genomes, and only one chloroplast genome of the genus ...
Kwanjeera Wanichthanarak, Intawat Nookaew, Phongthana Pasookhush, Thidathip Wongsurawat, Piroon Jenjaroenpun, Namkhang Leeratsuwan, Songsak Wattanachaisaereekul, Wonnop Visessanguan, Yongyut Sirivatanauksorn, Narong Nuntasaen, Chutima Kuhakarn, Vichai Reutrakul, Pravech Ajawatanawong, Sakda Khoomrung   +13 more
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Third-codon transversion rate-based _Nymphaea_ basal angiosperm phylogeny -- concordance with developmental evidence [PDF]

, 2007
Flowering plants (angiosperms) appeared on Earth rather suddenly approximately 130 million years ago and underwent a massive expansion in the subsequent 10-12 million years.
(Max) Zong-Ming Cheng, Gerald Tuskan, Timothy Tschaplinski, Xiaohan Yang, Xiaohan Yang   +4 more
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Phylogenomic Analysis and Dynamic Evolution of Chloroplast Genomes in Salicaceae

Frontiers in Plant Science, 2017
Chloroplast genomes of plants are highly conserved in both gene order and gene content. Analysis of the whole chloroplast genome is known to provide much more informative DNA sites and thus generates high resolution for plant phylogenies. Here, we report
Yuan Huang, Yuan Huang, Jun Wang, Yongping Yang, Chuanzhu Fan, Jiahui Chen, Jiahui Chen   +6 more
doaj   +1 more source

Phylogeny of Prokaryotes and Chloroplasts Revealed by a Simple Composition Approach on All Protein Sequences from Complete Genomes Without Sequence Alignment [PDF]

, 2005
The complete genomes of living organisms have provided much information on their phylogenetic relationships. Similarly, the complete genomes of chloroplasts have helped to resolve the evolution of this organelle in photosynthetic eukaryotes.
C Lemieux, CR Woese, CR Woese, D Sankoff, DH Moreira, E Chatton, E Mayr, E Pennisi, F Tekaia, FitchWM, GI McFadden, GI McFadden, GW Stuart, GW Stuart, J Adachi, J Las Rivas De, J Lin, J Qi, J Qi, J.Q. Deng, JA Eisen, JD Palmer, JR Brown, K.H. Chu, KH Chu, L.Q. Zhou, M Li, M Turmel, M Turmel, MA Ragan, MW Gray, MW Gray, N Saitou, O Weiss, RF Doolittle, RF Doolittle, RL Charlebois, RS Gupta, S.C. Long, ST Fitz-Gibbon, SV Edwards, V.V. Anh, VL Stirewalt, W Martin, W Martin, W Martin, Z.G. Yu, ZG Yu, ZG Yu, ZG Yu, ZG Yu   +50 more
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History of chloroplast genomics [PDF]

Photosynthesis Research, 2003
The presence of chloroplast DNA was established in 1963. With the development of recombinant DNA technologies, chloroplast DNA was selected as one of the first candidates for genome sequencing. The first physical map was reported for maize chloroplasts in 1976.
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Genes Translocated into the Plastid Inverted Repeat Show Decelerated Substitution Rates and Elevated GC Content. [PDF]

, 2016
Plant chloroplast genomes (plastomes) are characterized by an inverted repeat (IR) region and two larger single copy (SC) regions. Patterns of molecular evolution in the IR and SC regions differ, most notably by a reduced rate of nucleotide substitution ...
Kuo, Li-Yaung, Li, Fay-Wei, Pryer, Kathleen, Rothfels, Carl   +3 more
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Genome Editing of Plant Mitochondrial and Chloroplast Genomes

Plant And Cell Physiology, 2023
Abstract Plastids (including chloroplasts) and mitochondria are remnants of endosymbiotic bacteria, yet they maintain their own genomes, which encode vital components for photosynthesis and respiration, respectively. Organellar genomes have distinctive features, such as being present as multicopies, being mostly inherited maternally ...
Shin-ichi Arimura, Issei Nakazato
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Proteomic Analysis of Chloroplast-to-Chromoplast Transition in Tomato Reveals Metabolic Shifts Coupled with Disrupted Thylakoid Biogenesis Machinery and Elevated Energy-Production Components [PDF]

, 2012
A comparative proteomic approach was performed to identify differentially expressed proteins in plastids at three stages of tomato(Solanum lycopersicum) fruit ripening (mature-green, breaker, red). Stringent curation and processing of the data from three
Alba, Aldridge, Altschul, Andersson, Andon, Armbruster, Asano, Baginsky, Balmer, Bannai, Barry, Barsan, Benjamini, Benning, Bian, Birtić, Blanke, Booth, Botella-Pavía, Bouvier, Bouyssié, Bramley, Bräutigam, Cai, Camara, Chen, Chen, Cho, Deborde, Delmar, Delmar, Demartini, Dieterle, Egea, Egea, Emanuelsson, Emes, Fan, Faurobert, Ferro, Fischer, Harris, Heazlewood, Heazlewood, Hetherington, Huang, Issaq, Jebanathirajah, Jeong, Jimenez, Kahlau, Kato, Kato, Kleffmann, Krech, Lee, Li, Li, Liu, Liu, Liu, Ljubesić, Lopez-Juez, Lundquist, Lytovchenko, Maple, Maple, Marano, McAndrew, Millar, Moing, Neta-Sharir, Niewiadomski, Onishi, Osorio, Palma, Paoletti, Pech, Peng, Pierleoni, Pirrello, Plücken, Ren, Richly, Rocco, Rutschow, Schauer, Seigneurin-Berny, Shipman-Roston, Siddique, Simkin, Small, Smith, Spurr, Su, Sun, Suzuki, Thelen, Thimm, Thomson, Tiwari, Torgrip, van Wijk, Vitha, von Zychlinski, Waters, Yakir-Tamang, Zeng, Zhang, Zhu, Zybailov   +110 more
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Chloroplast envelope protein encoded by chloroplast genome

FEBS Letters, 1993
The gene product of an open reading frame of chloroplast genome, ORF 231 in pea, was immunochemically detected in chloroplast and etioplast envelopes. This is the first protein of a Chloroplast Envelope Membrane encoded by a chloroplast genome. It was named CEM A and the gene, cem A.
Sasaki, Yukiko, Sekiguchi, Kazumasa, Nagano, Yukio, Matsuno, Ryuichi   +3 more
openaire   +2 more sources