Dimer‐Specific FokT‐seq Reveals DNA‐Binding Dimerization and Novel Genomic Targets of TDP‐43
Loss of TDP‐43 dimerization is implicated in ALS, yet its mechanistic role remains elusive. This study introduces FokT, a novel system that restores TDP‐43 dimerization to map its DNA targets via FokT‐seq. The findings uncover key binding sites and offer a versatile tool for exploring dimer‐dependent transcriptional regulation.
Mingming Yang+4 more
wiley +1 more source
Enhancer Reprogramming Reveals the Tumorigenic Role of PTPRZ1 in Lung Squamous Cell Carcinoma
Lung squamous cell cancer (LUSC) is deadly due to lack of good treatments. Here, multiomics techniques are applied to LUSC tumors and find thousands of cancer‐specific enhancers controlling key genes. Interestingly, the gene PTPRZ1 is identified as a critical oncogene driven by the LUSC‐acquired enhancers. PTPRZ1 is activated by MDK, fueling cancer via
Yong‐Qiang Ning+11 more
wiley +1 more source
A haplotype-resolved chromosome-level genome assembly of Urochloa decumbens cv. Basilisk resolves its allopolyploid ancestry and composition. [PDF]
Ryan C+9 more
europepmc +1 more source
Interpretation of RNA Universe and Coding Potential Using IntRNA
This study constructs a multi‐channel deep learning framework IntRNA to interpret RNA universe and coding potential. IntRNA consistently performed the best among existing methods in various benchmarks. Moreover, IntRNA’s interpretability is also validated by real‐world analysis, which found some features indicating long‐distance contact between ...
Yunxia Wang+8 more
wiley +1 more source
The Power Duo: How the Interplay Between Nucleoid-Associated Proteins and Small Noncoding RNAs Orchestrates the Cellular Regulatory Symphony. [PDF]
Moutacharrif S+6 more
europepmc +1 more source
Repositioning Antimicrobial Peptides Against WHO‐Priority Fungi
The growing burden of drug‐resistant fungal infections, driven by pathogens such as Candida auris, Cryptococcus neoformans, and Aspergillus fumigatus, underscores the urgent need for novel antifungal therapies. This review explores antimicrobial peptides as promising agents with membrane‐disruptive activity, immunomodulatory properties, and delivery ...
Cesar Augusto Roque‐Borda+12 more
wiley +1 more source
Data-driven analyses of human antibody variable domain germlines: pairings, sequences and structural features. [PDF]
Seidler CA+5 more
europepmc +1 more source
Drosophila ring chromosomes interact with sisters and homologs to produce anaphase bridges in mitosis. [PDF]
Lin HC+7 more
europepmc +1 more source
Tests for segregation distortion in tetraploid F1 populations. [PDF]
Gerard D, Thakkar M, Ferrão LFV.
europepmc +1 more source
Simultaneous editing of SPO11-1, REC8 and OSD1 yields aneutetraploid soybeans. [PDF]
Wang J, Wang K, Yang WC, Li HJ.
europepmc +1 more source