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Comparative Genomics in the Triticeae
2009The genomes of grasses are very different in terms of size, ploidy level and chromosome number. Among them, the Triticeae species (wheat, barley, rye) have some of the largest and complex genomes. Comparative mapping studies between rice, maize, sorghum, barley and wheat have pioneered the field of plant comparative genomics a decade ago.
Feuillet, Catherine, Salse, Jerome
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Comparative Genomics for Prokaryotes
2017Bacteria and archaea, collectively known as prokaryotes, have in general genomes that are much smaller than those of eukaryotes. As a result, thousands of these genomes have been sequenced. In prokaryotes, gene architecture lacks the intron-exon structure of eukaryotic genes (with an occasional exception).
João C, Setubal +2 more
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Annual Review of Genomics and Human Genetics, 2004
▪ Abstract With the completion of the human genome sequence and the advent of technologies to study functional aspects of genomes, molecular comparisons between humans and other primates have gained momentum. The comparison of the human genome to the genomes of species closely related to humans allows the identification of genomic features that set ...
Wolfgang, Enard, Svante, Paabo
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▪ Abstract With the completion of the human genome sequence and the advent of technologies to study functional aspects of genomes, molecular comparisons between humans and other primates have gained momentum. The comparison of the human genome to the genomes of species closely related to humans allows the identification of genomic features that set ...
Wolfgang, Enard, Svante, Paabo
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Genome Mapping in Plant Comparative Genomics
Trends in Plant Science, 2016Genome mapping produces fingerprints of DNA sequences to construct a physical map of the whole genome. It provides contiguous, long-range information that complements and, in some cases, replaces sequencing data. Recent advances in genome-mapping technology will better allow researchers to detect large (>1kbp) structural variations between plant ...
Lindsay, Chaney +3 more
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Comparative Genomics in Drosophila
2017Since the pioneering studies of Thomas Hunt Morgan and coworkers at the dawn of the twentieth century, Drosophila melanogaster and its sister species have tremendously contributed to unveil the rules underlying animal genetics, development, behavior, evolution, and human disease.
Martin, Oti +2 more
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Comparative genomics: the bacterial pan-genome
Current Opinion in Microbiology, 2008Bacterial genome sequencing has become so easy and accessible that the genomes of multiple strains of more and more individual species have been and will be generated. These data sets provide for in depth analysis of intra-species diversity from various aspects.
Hervé, Tettelin +3 more
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Genome screening by comparative genomic hybridization
Trends in Genetics, 1997Comparative genomic hybridization (CGH) provides a molecular cytogenetic approach for genome-wide scanning of differences in DNA sequence copy number. The technique is now attracting wide-spread interest, especially among cancer researchers. The rapidly expanding database of CGH publications already covers about 1500 tumors and is beginning to reveal ...
F, Forozan +4 more
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The genomes and comparative genomics of Lactobacillus delbrueckii phages
Archives of Virology, 2011Lactobacillus delbrueckii phages are a great source of genetic diversity. Here, the genome sequences of Lb. delbrueckii phages LL-Ku, c5 and JCL1032 were analyzed in detail, and the genetic diversity of Lb. delbrueckii phages belonging to different taxonomic groups was explored.
Katja-Anneli, Riipinen +2 more
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Comparative Genomic Hybridization
2001Comparative genomic hybridization (CGH) allows a genome-wide survey of the relative copy number of tumor DNA in a single hybridization. The tumor-cell DNA (Test DNA) is hybridized together with a sex-matched normal DNA (Reference DNA) onto normal metaphase spreads.
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Newly sequenced genomes are being added to the tree of life at an unprecedented fast pace. A large proportion of such new genomes are phylogenetically close to previously sequenced and annotated genomes. In other cases, whole clades of closely related species or strains ought to be annotated simultaneously.
Stefanie, Nachtweide +2 more
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Stefanie, Nachtweide +2 more
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