Results 101 to 110 of about 3,295,261 (308)

Community Detection in Complex Networks by Dynamical Simplex Evolution [PDF]

open access: yes, 2007
We benchmark the dynamical simplex evolution (DSE) method with several of the currently available algorithms to detect communities in complex networks by comparing the fraction of correctly identified nodes for different levels of ``fuzziness'' of random networks composed of well defined communities.
arxiv   +1 more source

Decoding the dual role of autophagy in cancer through transcriptional and epigenetic regulation

open access: yesFEBS Letters, EarlyView.
Transcriptional and epigenetic regulation controls autophagy, which exerts context‐dependent effects on cancer: Autophagy suppresses tumorigenesis by maintaining cellular homeostasis or promotes tumor progression by supporting survival under stress. In this “In a Nutshell” article, we explore the intricate mechanisms of the dual function of autophagy ...
Young Suk Yu, Ik Soo Kim, Sung Hee Baek
wiley   +1 more source

Stability of synchronization in simplicial complexes

open access: yesNature Communications, 2021
Networks with higher order interactions, relevant to social groups, ecosystems and human brain, require new tools and instruments for their analysis. Gambuzza et al.
L. V. Gambuzza   +8 more
doaj   +1 more source

Trapping in complex networks

open access: yes, 2008
We investigate the trapping problem in Erdos-Renyi (ER) and Scale-Free (SF) networks. We calculate the evolution of the particle density $\rho(t)$ of random walkers in the presence of one or multiple traps with concentration $c$. We show using theory and
A. Kittas   +14 more
core   +2 more sources

Complexity of networks (Reprise) [PDF]

open access: yesComplexity, 2011
AbstractNetwork or graph structures are ubiquitous in the study of complex systems. Often, we are interested in complexity trends of these system as it evolves under some dynamic. An example might be looking at the complexity of a food web as species enter an ecosystem via migration or speciation, and leave via extinction.
openaire   +2 more sources

Patterns of complexity [PDF]

open access: yesNature Physics, 2010
The Turing mechanism provides a paradigm for the spontaneous generation of patterns in reaction–diffusion systems. A framework that describes Turing-pattern formation in the context of complex networks should provide a new basis for studying the phenomenon.
Pastor Satorras, Romualdo   +1 more
openaire   +3 more sources

A stepwise emergence of evolution in the RNA world

open access: yesFEBS Letters, EarlyView.
How did biological evolution emerge from chemical reactions? This perspective proposes a gradual scenario of self‐organization among RNA molecules, where catalytic feedback on random mixtures plays the central role. Short oligomers cross‐ligate, and self‐assembly enables heritable variations. An event of template‐externalization marks the transition to
Philippe Nghe
wiley   +1 more source

Tsallis entropy of complex networks [PDF]

open access: yesarXiv, 2015
How complex of the complex networks has attracted many researchers to explore it. The entropy is an useful method to describe the degree of the $complex$ of the complex networks. In this paper, a new method which is based on the Tsallis entropy is proposed to describe the $complex$ of the complex networks.
arxiv  

Quantum Google in a Complex Network [PDF]

open access: yesScientific Reports, 2013
Published by Macmillan Publishers Limited, part of Springer Nature, [London]
Paparo, Giuseppe Davide   +3 more
openaire   +9 more sources

The carboxylate “gripper” of the substrate is critical for C‐4 stereo‐inversion by UDP‐glucuronic acid 4‐epimerase

open access: yesFEBS Letters, EarlyView.
UDP‐glucuronic acid 4‐epimerase (UGAepi) catalyzes NAD+‐dependent interconversion of UDP‐glucuronic acid (UDP‐GlcA) and UDP‐galacturonic acid (UDP‐GalA) via C4‐oxidation, 4‐keto‐intermediate rotation, and C4‐reduction. Here, Borg et al. examined the role of the substrate's carboxylate group in the enzymic mechanism by analyzing NADH‐dependent reduction
Annika J. E. Borg   +2 more
wiley   +1 more source

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