Interplay between RNA‐protein interactions and RNA structures in gene regulation
FEBS Open Bio, EarlyView.Methodological advances in mapping transcriptome‐wide RNA‐protein interactions and RNA structures have started to uncover the potential of RNP conformations in gene regulation. Competing RNA–RNA, RNA‐protein and protein–protein interactions shape the compaction and function of RNPs throughout their lifetime and may provide novel therapeutic targets in ...
Jenni Rapakko +2 more
wiley +1 more source
Computational Complexity of Isometric Tensor-Network States
PRX QuantumWe determine the computational power of isometric tensor-network states (isoTNSs), a variational ansatz originally developed to numerically find and compute properties of gapped ground states and topological states in two dimensions.
Daniel Malz, Rahul Trivedi
doaj +1 more source
Curved and Layered Structures, 2017 Fiber reinforced anisotropic material abounds in biological world. It has been demonstrated in previous theoretical and experimental works that growth of biological soft tubular tissue plays a significant role in morphogenesis and pathology.
Yang Le +2 more
doaj +1 more source
Goal-oriented adaptive finite element methods with optimal computational complexity. [PDF]
Numer Math (Heidelb), 2023 Becker R +3 more
europepmc +1 more source
On the computational complexity of approximating distributions by probabilistic automata [PDF]
, 1992 Naoki Abe, Manfred K. Warmuth
openalex +1 more source
The computational complexity of the Chow form
, 2002 We present a bounded probability algorithm for the computation of the Chow forms of the equidimensional components of an algebraic variety. Its complexity is polynomial in the length and in the geometric degree of the input equation system defining the ...
Jeronimo, Gabriela +3 more
core +1 more source
A general model for analysis of linear and hyperbolic enzyme inhibition mechanisms
FEBS Open Bio, EarlyView.We developed a general enzyme kinetic model that integrates these six basic inhibition mechanism onto a single one. From this model, we deduced a general enzyme kinetic equation that through modulation of simple parameters, γ (the relative inhibitor affinity for two binding sites) and β (the reactivity of the enzyme–substrate–inhibitor complex), is ...
Rafael S. Chagas, Sandro R. Marana
wiley +1 more source
Splitting Choice and Computational Complexity Analysis of Decision Trees. [PDF]
Entropy (Basel), 2021 Zhao X, Nie X.
europepmc +1 more source
Overview of molecular signatures of senescence and associated resources: pros and cons
FEBS Open Bio, EarlyView.Cells can enter a stress response state termed cellular senescence that is involved in various diseases and aging. Detecting these cells is challenging due to the lack of universal biomarkers. This review presents the current state of senescence identification, from biomarkers to molecular signatures, compares tools and approaches, and highlights ...
Orestis A. Ntintas +6 more
wiley +1 more source
On the Computation and Communication Complexity of Parallel SGD with Dynamic Batch Sizes for Stochastic Non-Convex Optimization [PDF]
, 2019 Hao Yu, Rong Jin
openalex +1 more source