Results 41 to 50 of about 497,883 (326)

Protons induce calsequestrin conformational changes

open access: yesBiophysical Journal, 1996
Calsequestrin, a high-capacity, intermediate-affinity, calcium-binding protein present in the lumen of sarcoplasmic reticulum, undergoes extensive calcium-induced conformational changes at neutral pH that cause distinct intrinsic fluorescence changes.
Hidalgo Tapia, María Cecilia   +2 more
openaire   +3 more sources

Selective modulation of cellular voltage dependent calcium channels by hyperbaric pressure - a suggested HPNS partial mechanism

open access: yesFrontiers in Cellular Neuroscience, 2014
Professional deep sea divers experience motor and cognitive impairment, known as High Pressure Neurological Syndrome (HPNS), when exposed to pressures of 100 msw (1.1MPa) and above, considered to be the result of synaptic transmission alteration ...
Ben eAviner   +4 more
doaj   +1 more source

Crystal structure of a MarR family protein from the psychrophilic bacterium Paenisporosarcina sp. TG-14 in complex with a lipid-like molecule

open access: yesIUCrJ, 2021
MarR family proteins regulate the transcription of multiple antibiotic-resistance genes and are widely found in bacteria and archaea. Recently, a new MarR family gene was identified by genome analysis of the psychrophilic bacterium Paenisporosarcina sp ...
Jisub Hwang   +9 more
doaj   +1 more source

Pressure-dependent 13C chemical shifts in proteins: Origins and applications [PDF]

open access: yes, 2009
Pressure-dependent (13)C chemical shifts have been measured for aliphatic carbons in barnase and Protein G. Up to 200 MPa (2 kbar), most shift changes are linear, demonstrating pressure-independent compressibilities.
Akasaka, A.   +3 more
core   +1 more source

Parsimony in Protein Conformational Change [PDF]

open access: yesStructure, 2015
Protein conformational change is analyzed by finding the minimalist backbone torsion angle rotations that superpose crystal structures within experimental error. Of several approaches for enforcing parsimony during flexible least-squares superposition, an ℓ(1)-norm restraint provided greatest consistency with independent indications of flexibility from
Chapman, Brynmor K.   +4 more
openaire   +2 more sources

Chloride Ion Transport by the E. coli CLC Cl−/H+ Antiporter: A Combined Quantum-Mechanical and Molecular-Mechanical Study

open access: yesFrontiers in Chemistry, 2018
We performed steered molecular dynamics (SMD) and umbrella sampling simulations of Cl− ion migration through the transmembrane domain of a prototypical E.
Chun-Hung Wang   +4 more
doaj   +1 more source

T cell receptor engagement triggers its CD3epsilon and CD3zeta subunits to adopt a compact, locked conformation. [PDF]

open access: yesPLoS ONE, 2008
How the T cell antigen receptor (TCR) discriminates between molecularly related peptide/Major Histocompatibility Complex (pMHC) ligands and converts this information into different possible signaling outcomes is still not understood.
Ruth M Risueño   +2 more
doaj   +1 more source

Allosteric activation of preformed EGF receptor dimers by a single ligand binding event

open access: yesFrontiers in Endocrinology, 2022
Aberrant activation of the epidermal growth factor receptor (EGFR) by mutations has been implicated in a variety of human cancers. Elucidation of the structure of the full-length receptor is essential to understand the molecular mechanisms underlying its
Endang R. Purba   +6 more
doaj   +1 more source

Identifying conformational changes with site-directed spin labeling reveals that the GTPase domain of HydF is a molecular switch [PDF]

open access: yes, 2017
[FeFe]-hydrogenases catalyse the reduction of protons to hydrogen at a complex 2Fe[4Fe4S] center called H-cluster. The assembly of this active site is a multistep process involving three proteins, HydE, HydF and HydG.
Acquasaliente, Laura   +8 more
core   +1 more source

Ca2+-based allosteric switches and shape shifting in RGLG1 VWA domain

open access: yesComputational and Structural Biotechnology Journal, 2020
RGLG1 is an E3 ubiquitin ligase in Arabidopsis thaliana that participates in ABA signaling and regulates apical dominance. Here, we present crystal structures of RGLG1 VWA domain, revealing two novel calcium ions binding sites (NCBS1 and NCBS2 ...
Qin Wang   +9 more
doaj   +1 more source

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