Single‐molecule DNA flow‐stretch assays for high‐throughput DNA–protein interaction studies
We describe an optimised single‐molecule DNA flow‐stretch assay that visualises DNA–protein interactions in real time. Linear DNA fragments are tethered to a surface and stretched by buffer flow for fluorescence imaging. Using λ and φX174 DNA, this protocol enhances reproducibility and accessibility, providing a versatile approach for studying diverse ...
Ayush Kumar Ganguli +8 more
wiley +1 more source
Stochastic impulse control with discounted and ergodic optimization criteria: A comparative study for the control of risky holdings [PDF]
We consider a single-asset investment fund that in the absence of transactions costs would hold a constant amount of wealth in the risky asset. In the presence of market frictions wealth is allowed to fluctuate within a control band: Its upper (lower ...
Yiannis Kamarianakis +1 more
core
Optimizing photoactivation of PA‐mCherry for optical pooled CRISPR screens
Photoactivatable PA‐mCherry finds widespread use to optically tag individual cells. However, confocal 405 nm UV laser‐scanning (normal scan) is much less efficient than widefield UV illumination, limiting the use of PA‐mCherry on confocal instruments. We remedy this limitation by reporting that rapid and repeated confocal scanning with a low‐intensity,
Sravasti Mukherjee +3 more
wiley +1 more source
RoundMi: A quantitative method to analyze mitochondrial morphology in mitotic cells
RoundMi is a workflow for rapid analysis of mitochondrial morphology in mitotic cells. By combining adaptive preprocessing with automated segmentation and quantification, it enables accurate measurements from single focal plane images, reducing acquisition time and computational demands while remaining compatible with high‐throughput fixed and live ...
Elmira Parvindokht Bararpour +2 more
wiley +1 more source
Cost function design for evolutionary optimization of deterministic chaos control
This contribution deals with optimization of the control of chaos by means of evolutionary algorithms. The main aim of this work is to show that evolutionary algorithms are capable of optimization of chaos control and to show several methods of ...
Zelinka, Ivan +2 more
core +1 more source
Drugs previously repurposed to target blood cancers reduced neuroblastoma and glioblastoma cell growth and viability. However, their levels of anticancer activity were different and their clinical application may be problematic due to side effects at effective doses.
Abhishek Kharawatkar +4 more
wiley +1 more source
Offshore wind turbines have garnered significant attention recently due to their substantial wind energy harvesting capabilities. Pitch control plays a crucial role in maintaining the rated generator speed, particularly in offshore environments ...
Valayapathy Lakshmi Narayanan +3 more
core +1 more source
Aquaporin‐3 and aquaporin‐5 impact the development of pancreatic ductal adenocarcinoma spheroids
Schematic representation of the role of aquaporin‐3 (AQP3) and aquaporin‐5 (AQP5) in pancreatic ductal adenocarcinoma (PDAC). Both proteins are upregulated in PDAC and are associated with tumor progression and metastatic potential. Silencing AQP3 or AQP5 in PDAC spheroids results in decreased diameter, area, and overall growth, underscoring their key ...
Catarina Pimpão +3 more
wiley +1 more source
A Multi-Criteria Non-Linear Optimization Model for the Control and Management of a Tropical Fishery [PDF]
One of the principal problems when dealing with fishery resource management is to estimate strategies that satisfy biological, economic and social objectives simultaneously.
Seijo, Juan Carlos +1 more
core
Directed evolution of enzymes at the crossroads of tradition and innovation
An iterative cycle of data‐driven enzyme optimization comprising four stages: genetic diversification of a template enzyme, expression of protein variants, high‐throughput evaluation, and machine‐learning‐guided redesign of the next variant library.
Maria Tomkova +2 more
wiley +1 more source

