Results 71 to 80 of about 2,351 (162)

TraRECo: a greedy approach based de novo transcriptome assembler with read error correction using consensus matrix

BMC Genomics, 2018
Background The challenges when developing a good de novo transcriptome assembler include how to deal with read errors and sequence repeats. Almost all de novo assemblers utilize a de Bruijn graph, with which complexity grows linearly with data size while
Seokhyun Yoon, Daeseung Kim, Keunsoo Kang, Woong June Park   +3 more
doaj   +1 more source

When Screens Replace Sleep: Short Video Addiction Impairs Executive Function Through Sleep Disruption in Youth—Is Physical Activity the Antidote?

Brain and Behavior, Volume 16, Issue 4, April 2026.
Using a sample of 978 Chinese adolescents, this graphical abstract presents a moderated mediation model in which sleep quality (SQ) partially mediates the negative effect of short video addiction (SVA) on executive function (EF), while physical activity (PA) moderates the direct SVAEF pathway.
Ting Xiao, Haiou Peng, Zhiru Liang, Mengting Pan, Yang Liu, Yanfei Wang, Bo Wang, Wenxi Tang   +7 more
wiley   +1 more source

Bidirectional Variable-Order de Bruijn Graphs [PDF]

International Journal of Foundations of Computer Science, 2016
Compressed suffix trees and bidirectional FM-indexes can store a set of strings and support queries that let us explore the set of substrings they contain, adding and deleting characters on both the left and right, but they can use much more space than a de Bruijn graph for the strings.
Djamal Belazzougui, Travis Gagie, Veli Mäkinen, Marco Previtali, Simon J. Puglisi   +4 more
openaire   +4 more sources

Wolf Presence Disrupts Seasonal Variation in Hair Cortisol Among Free‐Ranging Beef Cattle

Ecology and Evolution, Volume 16, Issue 4, April 2026.
Predators exert indirect effects on prey populations beyond direct predation, but how predator reintroduction restructures prey physiology remains poorly understood. Using hair cortisol analysis in cattle exposed versus unexposed to wolves, we found that wolf presence disrupted normal seasonal cortisol regulation patterns.
Christina M. Nord, Alexander J. Pritchard, Rosemary A. Blersch, Brenda McCowan, Jessica J. Vandeleest, Kenneth W. Tate, Tina L. Saitone   +6 more
wiley   +1 more source

Parallelized short read assembly of large genomes using de Bruijn graphs

BMC Bioinformatics, 2011
Background Next-generation sequencing technologies have given rise to the explosive increase in DNA sequencing throughput, and have promoted the recent development of de novo short read assemblers.
Liu Yongchao, Schmidt Bertil, Maskell Douglas L   +2 more
doaj   +1 more source

Assembly of the Complete Sitka Spruce Chloroplast Genome Using 10X Genomics' GemCode Sequencing Data. [PDF]

PLoS ONE, 2016
The linked read sequencing library preparation platform by 10X Genomics produces barcoded sequencing libraries, which are subsequently sequenced using the Illumina short read sequencing technology.
Lauren Coombe, René L Warren, Shaun D Jackman, Chen Yang, Benjamin P Vandervalk, Richard A Moore, Stephen Pleasance, Robin J Coope, Joerg Bohlmann, Robert A Holt, Steven J M Jones, Inanc Birol   +11 more
doaj   +1 more source

Rumen Mycobiome Thiamine Metabolism Contributes to Subacute Rumen Acidosis Tolerance in Goats Through Enhancing Epithelial Cell Proliferation via IGFBP2/IGF1 Axis Activation

Exploration, Volume 6, Issue 2, April 2026.
Schematic illustration of the mechanism underlying the differences between SARA‐susceptible and SARA‐tolerant dairy goats fed a high‐concentrate diet. SARA‐susceptible goats (HCS) exhibit low rumen pH and metabolic decline, characterized by epithelial inflammation.
Jingyi Xu, Xiaodong Chen, Yi Ma, Jianrong Ren, Guanghao Xu, Peilin Zhang, Wenhao Jia, Quanqiu Deng, Yuquan Xiao, Junhu Yao, Shengru Wu   +10 more
wiley   +1 more source

Flood Risk Assessment of Urban Critical Infrastructures Using Crowd‐Sourced and Open Data on Hazard, Exposure and Vulnerability

Journal of Flood Risk Management, Volume 19, Issue 1, March 2026.
ABSTRACT Worldwide, cities rely on the proper functioning of critical infrastructures (CIs) such as electricity, telecommunication, water supply and transportation. Failure of those infrastructures can lead to significant and long‐lasting impacts, even far beyond the flooded areas due to cascading effects.
Andreas Burzel, Martine van den Boomen, Matthijs Kok   +2 more
wiley   +1 more source

The directed genus of the de Bruijn graph

Discrete Mathematics, 2009
zbMATH Open Web Interface contents unavailable due to conflicting licenses.
Alfred W. Hales, Nora Hartsfield
openaire   +2 more sources

Changes in corticospinal excitability in response to mediolateral gait instability

Experimental Physiology, Volume 111, Issue 3, Page 1279-1298, 1 March 2026.
Abstract Unpredictable gait disturbances, particularly in the mediolateral direction, pose a significant challenge to stability and are a common contributor to falls. Although the corticospinal tract is critical for gait and postural control, its response to such instabilities remains unclear.
Raven O. Huiberts, Sjoerd M. Bruijn, Jennifer L. Davies   +2 more
wiley   +1 more source