Frontiers in Marine Science, 2022 Microbial reductive dechlorination has been considered an effective process for the clean-up of organohalide-contaminated sites. Heavy metal ions are commonly present as co-contaminants in various organohalide-contaminated sites.
Jun Yan, Yi Yang, Xiuying Li
exaly +3 more sources
Metabolome patterns identify active dechlorination in bioaugmentation consortium SDC-9™
Frontiers in Microbiology, 2022 Ultra-high performance liquid chromatography–high-resolution mass spectrometry (UPHLC–HRMS) is used to discover and monitor single or sets of biomarkers informing about metabolic processes of interest.
Shawn Campagna +2 more
exaly +3 more sources
Geochemical variability and microbial metabolic functions in oligotrophic sediments exposed to minor seepage [PDF]
Frontiers in MicrobiologyLow primary productivity in Barents Sea surface waters and limited nutrient flux to the seafloor favor nitrification and nitrogen fixation in deep waters, resulting in a dearth of organic substrates in local sediments. The addition of labile hydrocarbons
Ellen Schnabel +13 more
doaj +2 more sources
Distribution and Variation Characteristics of Branched Glycerol Dialkyl Glycerol Tetraethers (BrGDGTs) in Sediment Cores Along the Nearshore-to-Offshore Gradient of the East China Sea and Their Correlation with Microbial Community Diversity [PDF]
BiologyBranched glycerol dialkyl glycerol tetraethers (brGDGTs) are promising molecular biomarkers widely applied in paleoenvironmental reconstructions, including temperature and pH.
Ting Zeng +4 more
doaj +2 more sources
Characterization of prokaryotic plankton community structure in the Southern East China Sea using combined 16S-rDNA and 16S-rRNA [PDF]
Scientific ReportsProkaryotic plankton play a crucial role in marine biogeochemical processes, but their activities can vary significantly among different taxonomic groups.
Yi-Ting Chang +5 more
doaj +2 more sources
The chromosomal genome sequence of the sponge, Corticium candelabrum Schmidt, 1862 and its associated microbial metagenome sequences [version 1; peer review: 3 approved] [PDF]
Wellcome Open ResearchWe present a genome assembly from a specimen of Corticium candelabrum (sponge; Porifera; Homoscleromorpha; Homosclerophorida; Plakinidae). The genome sequence has a total length of 185.49 megabases.
Eerik Aunin +12 more
doaj +2 more sources
Frontiers in Microbiology, 2016 The toxicity of polychlorinated biphenyls (PCB) can be efficiently reduced in contaminated marine sediments through the reductive dechlorination process lead by anaerobic organohalide bacteria.
Simona Rossetti +2 more
exaly +3 more sources
Global prevalence of organohalide-respiring bacteria dechlorinating polychlorinated biphenyls in sewage sludge [PDF]
MicrobiomeBackground Massive amounts of sewage sludge are generated during biological sewage treatment and are commonly subjected to anaerobic digestion, land application, and landfill disposal.
Guofang Xu +4 more
doaj +2 more sources
Genome sequencing of a single cell of the widely distributed marine subsurface Dehalococcoidia, phylum Chloroflexi [PDF]
The ISME Journal, 2013 Abstract Bacteria of the class Dehalococcoidia (DEH), phylum Chloroflexi, are widely distributed in the marine subsurface, yet metabolic properties of the many uncultivated lineages are completely unknown. This study therefore analysed genomic content from a single DEH cell designated ‘DEH-J10’ obtained from the sediments of Aarhus ...
Kenneth Wasmund +7 more
openalex +3 more sources
, 2017 Additional file 4: Table S2. Features of primer pairs designed in this study. The primers target specifically VLD-1 and VLD-2 16S rRNA genes. The table report sequence, melting temperatures and in silico specificity analyses.
Andrea Nuzzo +3 more
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