Results 31 to 40 of about 8,013,557 (321)

Haisu: Hierarchically supervised nonlinear dimensionality reduction.

open access: yesPLoS Computational Biology, 2022
We propose a novel strategy for incorporating hierarchical supervised label information into nonlinear dimensionality reduction techniques. Specifically, we extend t-SNE, UMAP, and PHATE to include known or predicted class labels and demonstrate the ...
Kevin Christopher VanHorn   +1 more
doaj   +1 more source

An Orthogonal Locality and Globality Dimensionality Reduction Method Based on Twin Eigen Decomposition

open access: yesIEEE Access, 2021
Dimensionality reduction is a hot research topic in pattern recognition. Traditional dimensionality reduction methods can be separated into linear dimensionality reduction methods and nonlinear dimensionality reduction methods.
Shuzhi Su, Gang Zhu, Yanmin Zhu
doaj   +1 more source

A Comparison for Dimensionality Reduction Methods of Single-Cell RNA-seq Data

open access: yesFrontiers in Genetics, 2021
Single-cell RNA sequencing (scRNA-seq) is a high-throughput sequencing technology performed at the level of an individual cell, which can have a potential to understand cellular heterogeneity.
Ruizhi Xiang   +5 more
semanticscholar   +1 more source

Adaptive slope reliability analysis method based on sliced inverse regression dimensionality reduction

open access: yesFrontiers in Ecology and Evolution, 2023
The response surface model has been widely used in slope reliability analysis owing to its efficiency. However, this method still has certain limitations, especially the curse of high dimensionality when considering the spatial variability of ...
Zheng Zhou   +12 more
doaj   +1 more source

Dimensionality reduction for visualizing single-cell data using UMAP

open access: yesNature Biotechnology, 2018
Advances in single-cell technologies have enabled high-resolution dissection of tissue composition. Several tools for dimensionality reduction are available to analyze the large number of parameters generated in single-cell studies. Recently, a nonlinear
E. Becht   +7 more
semanticscholar   +1 more source

Effective and efficient approach in IoT Botnet detection

open access: yesJurnal Ilmiah SINERGI, 2023
Internet of Things (IoT) technology presents an advantage to daily life, but this advantage is not a guarantee of security. This is because cyber-attacks, such as botnets, remain a threat to the user.
Susanto Susanto   +4 more
doaj   +1 more source

UMAP as a Dimensionality Reduction Tool for Molecular Dynamics Simulations of Biomacromolecules: A Comparison Study.

open access: yesJournal of Physical Chemistry B, 2021
Proteins are the molecular machines of life. The multitude of possible conformations that proteins can adopt determines their free-energy landscapes.
Francesco Trozzi, Xinlei Wang, Peng Tao
semanticscholar   +1 more source

Dynamics of dimensional reduction

open access: yesPhysics Letters B, 1980
In d-dimensional unified theories that, along with gravity, contain an antisymmetric tensor field of rank s-1, preferential compactification of d-s or of s space-like dimensions is found to occur. This is the case in 11-dimensional supergravity where s = 4.
Peter G.O. FREUND, Mark A. RUBIN
openaire   +1 more source

Spontaneous dimensional reduction? [PDF]

open access: yesAIP Conference Proceedings, 2012
To appear in Proc.
openaire   +2 more sources

MultiMAP: dimensionality reduction and integration of multimodal data

open access: yesGenome Biology, 2021
Multimodal data is rapidly growing in many fields of science and engineering, including single-cell biology. We introduce MultiMAP, a novel algorithm for dimensionality reduction and integration.
M. S. Jain   +12 more
semanticscholar   +1 more source

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