Results 71 to 80 of about 66,386 (283)

PROTAX-GPU: a scalable probabilistic taxonomic classification system for DNA barcodes

Philosophical Transactions of the Royal Society B: Biological Sciences
DNA-based identification is vital for classifying biological specimens, yet methods to quantify the uncertainty of sequence-based taxonomic assignments are scarce. Challenges arise from noisy reference databases, including mislabelled entries and missing taxa.
Roy Li, Sujeevan Ratnasingham, Iuliia Zarubiieva, Panu Somervuo, Graham W. Taylor   +4 more
openaire   +3 more sources

Taxonomic characterization of Tanakia species (Acheilognathidae) using DNA barcoding analyses

Mitochondrial DNA Part A, 2017
Tanakia is a bitterling genus with six species found in Far East Asia. Our aim was to construct the standard DNA barcode database available for the identification of six Tanakia species by comparing the range of intra- and inter-specific genetic distances, identifying the phylogenetic placement of each Tanakia species and providing the unique barcode ...
Ho Young Suk, Dacotah Anderson, Hari Won, Hangkyo Lim, Hyung-Bae Jeon   +4 more
openaire   +3 more sources

Current trends in single‐cell RNA sequencing applications in diabetes mellitus

FEBS Open Bio, EarlyView.
Single‐cell RNA sequencing is a powerful approach to decipher the cellular and molecular landscape at a single‐cell resolution. The rapid development of this technology has led to a wide range of applications, including the detection of cellular and molecular mechanisms and the identification and introduction of novel potential diagnostic and ...
Seyed Sajjad Zadian, Khodakaram Jahanbin, Shekoofeh Nikooei, Marzieh Rostaminejad, Arezoo Rahimi, Pedram Abdizadeh, Behnam Alipoor   +6 more
wiley   +1 more source

Interplay between RNA‐protein interactions and RNA structures in gene regulation

FEBS Open Bio, EarlyView.
Methodological advances in mapping transcriptome‐wide RNA‐protein interactions and RNA structures have started to uncover the potential of RNP conformations in gene regulation. Competing RNA–RNA, RNA‐protein and protein–protein interactions shape the compaction and function of RNPs throughout their lifetime and may provide novel therapeutic targets in ...
Jenni Rapakko, Mauro Scaravilli, Minna‐Liisa Änkö   +2 more
wiley   +1 more source

DNA barcoding of Oryza: conventional, specific, and super barcodes

Plant Molecular Biology, 2020
We applied the phylogenomics to clarify the concept of rice species, aid in the identification and use of rice germplasms, and support rice biodiversity.
Wen Zhang, Yuzhe Sun, Jia Liu, Chao Xu, Xin-Hui Zou, Xun Chen, Yanlei Liu, Ping Wu, Xueying Yang, Shiliang Zhou   +9 more
semanticscholar   +1 more source

Age‐Related Changes in Myeloid Cells and Their Impact on Subcutaneous Melanoma Growth in Mice

Aging and Cancer, EarlyView.
Our findings reveal that age‐related changes in subcutaneous melanoma growth and immunotherapy response are context‐dependent. In models where tumor growth and treatment resistance increase with age, this effect is partly driven by enhanced immunosuppression from myeloperoxidase‐active Gr‐1⁺ myeloid cells.
Kaitlyn M. Landreth, Dylan D. Thomas, Remi Nohoesu, Angisha Basnet, F. Heath Damron, Mary Garland‐Kledzik, Emel Sen Kilic, Tracy W. Liu   +7 more
wiley   +1 more source

A taxonomic review of the order Mantodea in Korea based on morphology and DNA barcodes

ZooKeys
A taxonomic study of Korean Mantodea using morphological and molecular characters (COI) is presented. Eight species [Amantis nawai (Shiraki, 1908), Acromantis japonica Westwood, 1889, Mantis religiosa sinica Bazyluk, 1960, Statilia maculata (Thunberg, 1784), Tenodera angustipennis Saussure, 1869, T.
Jaeil Shim, Jeong-Hun Song
openaire   +4 more sources

Martin7

Preslia, 2023
Molecular identification of organisms is now a common practice and, increasingly, species are identified from environmental samples. However, for most organisms, we still lack comprehensive reference databases of DNA barcodes to identify the sequences produced.
Vondrák, Jan, Svoboda, Stanislav, Kosnar, Jirí, Malicek, Jirí, Soun, Jaroslav, Frolov, Ivan, Svensson, Måns, Novotný, Petr, Palice, Zdenek   +8 more
openaire   +2 more sources

Durable B‐Cell Impairment While Sparing IgA B Cells After Ocrelizumab Therapy in Multiple Sclerosis

Annals of Clinical and Translational Neurology, EarlyView.
ABSTRACT Objectives Ocrelizumab (OCR), a humanized anti‐CD20 monoclonal antibody, is highly efficient in relapsing–remitting multiple sclerosis (RR‐MS). We assessed early cellular B‐cell profiles in patients prior to OCR treatment, on OCR treatment, and after 15 months of therapy discontinuation.
Alexandra Garcia, Stephane Rodriguez, Emilie Dugast, Christine Lebrun‐Frenay, Eric Thouvenot, Jérôme de Sèze, Emmanuelle Le Page, Sandra Vukusic, Inès Doghri, Eric Berger, Olivier Casez, Pierre Labauge, Aurélie Ruet, Catarina Raposo, Fabienne Le Frère, Arnaud B. Nicot, Sandrine Wiertlewski, Pierre‐Antoine Gourraud, Laure Michel, Laureline Berthelot, David‐Axel Laplaud   +20 more
wiley   +1 more source

High-throughput DNA barcoding of oligochaetes for abundance-based indices to assess the biological quality of sediments in streams and lakes

Scientific Reports, 2020
Aquatic oligochaete communities are valuable indicators of the biological quality of sediments in streams and lakes, but identification of specimens to the species level based on morphological features requires solid expertise in taxonomy and is possible
R. Vivien, L. APOTHÉLOZ-PERRET-GENTIL, J. Pawłowski, I. Werner, M. Lafont, B. Ferrari   +5 more
semanticscholar   +1 more source