Cryptographic approaches to authenticating synthetic DNA sequences. [PDF]
Berezin CT +3 more
europepmc +1 more source
Dataset of chloroplast DNA sequences, <i>ndhC-trnV, rpoA, trnK-matK,</i> and <i>trnK-rps16</i> regions of <i>Platycodon grandiflorus</i> (Jacq.) A.DC. from Vietnam. [PDF]
Ngo DM +4 more
europepmc +1 more source
HVSeeker: a deep-learning-based method for identification of host and viral DNA sequences. [PDF]
Al-Najim A +4 more
europepmc +1 more source
Independent evolution of satellite DNA sequences in homologous sex chromosomes of Neotropical armored catfish (Harttia). [PDF]
Sassi FMC +8 more
europepmc +1 more source
CGRclust: Chaos Game Representation for twin contrastive clustering of unlabelled DNA sequences. [PDF]
Alipour F, Hill KA, Kari L.
europepmc +1 more source
A Genome-Wide Analysis of Nuclear Mitochondrial DNA Sequences (NUMTs) in Chrysomelidae Species (Coleoptera). [PDF]
He Y, Ge S, Liang H.
europepmc +1 more source
In silico design of DNA sequences for in vivo nucleosome positioning. [PDF]
Routhier E +7 more
europepmc +1 more source
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DNA Sequencing with Transposons
Journal of Computational Biology, 2000The use of transposons offers the possibility of a directed approach to DNA sequencing, where a target DNA up to about 6kb in length can be sequenced quickly and with minimal redundancy. Transposons are mobile DNA elements which can be inserted in a reasonably random fashion into the target DNA.
Simon Cawley, Terence P. Speed
openaire +3 more sources
Aligning a DNA sequence with a protein sequence
Proceedings of the first annual international conference on Computational molecular biology - RECOMB '97, 1997We develop several algorithms for the problem of aligning DNA sequence with a protein sequence. Our methods account for frameshift errors, but not for introns in the DNA sequence. Thus, they are particularly appropriate for comparing a cDNA sequence that suffers from sequencing errors with an amino acid sequence or a protein sequence database.
Zheng Zhang 0004 +2 more
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Characteristic Sequences for DNA Primary Sequence
Journal of Chemical Information and Computer Sciences, 2002A DNA sequence can be identified with a word over an alphabet N = [A, C, G, T]. Characteristic sequences of a DNA sequence are given in term of classifications of bases of nucleic acids. Using the characteristic sequences, we construct a set of 2 x 2 matrices to represent DNA primary sequences, which are based on counting of the frequency of occurrence
Ping-an He 0001, Jun Wang
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