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Docking Simulation of Chemerin-9 and ChemR23 Receptor
Proceedings of the 2020 10th International Conference on Bioscience, Biochemistry and Bioinformatics, 2020Chemerin-9 is a nonapeptide that corresponds to the YFPGQFAFS sequence on the C-terminus of Chemerin protein. Recent clinical and animal studies using mice, it has been recently reported that Chemerin-9 binds to the ChemR23 receptor and can suppress the inflammation-related diseases such as arteriosclerosis.In this study, molecular dynamics simulations
Keiichi Nobuoka +5 more
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The translation and docking simulator
SIMULATION, 1970This article describes the Translation and Docking Sim ulator (TDS) used to support the Gemini as well as the Apollo space flight programs. The simulator was origi nally conceived, designed, built, and operated as a Gem ini simulator. The six-degrees-of-freedom relative mo tion of the crew station was simulated with an actual out-the-window view of ...
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Space Docking Simulation Simulator Overview
Recent Patents on EngineeringBackground: Docking mechanism ground simulation test technology has been a significant issue in the aerospace industry. Docking mechanisms must pass various conventional evaluation tests as a class of electromechanical space products and other space products.
Yuan Zhang, Yibing Wang
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Differential Evolution for Docking Simulations
Early stages of drug discovery rely on docking programs to carry out computational screens to find novel potential binders for a protein target. Protein-ligand docking programs consist basically of a search algorithm and a scoring function. This chapter focuses on the search algorithm used in docking simulations. It explains how to use the differentialAmauri Duarte, da Silva +3 more
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Protein‐protein recognition analyzed by docking simulation
Proteins: Structure, Function, and Bioinformatics, 1991AbstractAntibody–lysozyme and protease–inhibitor complexes are reconstituted by docking lysozyme as a rigid body onto the combining site of the antibodies and the inhibitors onto the active site of the proteases. Simplified protein models with one sphere per residue are subjected to simulated annealing using a crude energy function where the attractive
J, Cherfils, S, Duquerroy, J, Janin
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Hybrid Realtime Simulation of the Space Docking Process
16th International Conference on Artificial Reality and Telexistence--Workshops (ICAT'06), 2006In order to test the space docking mechanism on the ground, the docking process of two spacecrafts must be simulated. The hybrid simulation (hardware-in-loop simulation) is a preferred method for its great applicability to different spacecrafts. Therefore, a space docking hybrid simulation (SDHS) prototype system is established.
Hao Yan +3 more
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Integrating Molecular Docking and Molecular Dynamics Simulations
2019Computational methods, applied at the early stages of the drug design process, use current technology to provide valuable insights into the understanding of chemical systems in a virtual manner, complementing experimental analysis. Molecular docking is an in silico method employed to foresee binding modes of small compounds or macromolecules in contact
Lucianna H S, Santos +2 more
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Ligand Docking Simulations by Generalized-Ensemble Algorithms
2013In protein chemistry and structural biology, conventional simulations in physical statistical mechanical ensembles, such as the canonical ensemble with fixed temperature and isobaric-isothermal ensemble with fixed temperature and pressure, face a great difficulty.
Yuko, Okamoto +2 more
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R68-34 Hybrid Apollo Docking Simulation
IEEE Transactions on Computers, 1968This is a somewhat discursive but informative article on the hybrid Apollo docking simulation. The authors do not identify their objective in writing the paper until the very last sentence of the concluding section, where they state: "It is hoped that some part of the description of the problems, solutions, and experiences will be useful to others who ...
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Protein Ligand Docking Using Simulated Jumping
2016Molecular docking is an essential topic of study as it is crucial in numerous biological processes such as signal transduction and gene expression. Computational efforts to predict ligand docking is preferable to costly x-ray crystallography and Nuclear Magnetic Resonance (NMR) yet technology today remains incompetent in exploring vast search spaces ...
Sally Chen Woon Peh, Jer Lang Hong
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