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Multimodal contrastive representation learning for drug-target binding affinity prediction
Methods, 2023In the biomedical field, the efficacy of most drugs is demonstrated by their interactions with targets, meanwhile, accurate prediction of the strength of drug-target binding is extremely important for drug development efforts. Traditional bioassay-based drug-target binding affinity (DTA) prediction methods cannot meet the needs of drug R&D in the era ...
Linlin, Zhang +4 more
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AttentionDTA: prediction of drug–target binding affinity using attention model
2019 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2019In bioinformatics, machine learning-based prediction of drug-target interaction (DTI) plays an important role in virtual screening of drug discovery. DTI prediction, which have been treated as a binary classification problem, depends on the concentration of two molecules, the interaction between two molecules, and other factors.
Qichang Zhao +4 more
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Effective drug-target affinity prediction via generative active learning
Information SciencesYuansheng Liu +2 more
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Drug-target Affinity Prediction by Molecule Secondary Structure Representation Network
Current Medicinal ChemistryIntroduction: Identification of drug-target interactions (DTI) is a crucial step in drug development with high specificity and low toxicity. To accelerate the process, computer-aided DTI prediction algorithms have been used to screen compounds or targets rapidly. Furthermore, DTI prediction can be used to identify potential targets for existing drugs,
Yuewei, Tang +3 more
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GFLearn: Generalized Feature Learning for Drug-Target Binding Affinity Prediction
IEEE Journal of Biomedical and Health InformaticsPredicting drug-target binding affinity is critical for drug discovery, as it helps identify promising drug candidates and predict their effectiveness. Recent advancements in deep learning have made significant progress in tackling this task. However, existing methods heavily rely on training data, and their performance is often limited when predicting
Zibo Huang, Xinrui Weng, Le Ou-Yang
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Classification prediction of drug target binding affinity based on the MolrProtTrans model
Analytical BiochemistryPredicting drug-target interactions is essential for virtual drug screening. While many models predict the binding affinity between small molecules and proteins, they often overemphasize molecular features while overlooking important protein characteristics, leading to biased predictions.
Yicun Lin +3 more
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Contrastive Meta-Learning for Drug-Target Binding Affinity Prediction
2022 IEEE International Conference on Bioinformatics and Biomedicine (BIBM), 2022Mei Li +4 more
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Drug-Target Affinity Prediction Based on Improved GraphDTA
2023 5th International Conference on Robotics and Computer Vision (ICRCV), 2023Zi Ye +3 more
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Prediction of drug-target binding affinity based on deep learning models
Computers in Biology and MedicineThe prediction of drug-target binding affinity (DTA) plays an important role in drug discovery. Computerized virtual screening techniques have been used for DTA prediction, greatly reducing the time and economic costs of drug discovery. However, these techniques have not succeeded in reversing the low success rate of new drug development.
Hao Zhang +4 more
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Current Computer-Aided Drug Design
Introduction/Objective: Traditional drug discovery methods face efficiency bottlenecks in predicting drug-target binding affinity (DTA), particularly for kinase inhibitor screening. This study proposes GTDDTA-a novel deep learning framework based on graph transformers and self-attention mechanisms-to address ...
Shiqian, Han, Jiahao, Shi, Jun, Wang
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Introduction/Objective: Traditional drug discovery methods face efficiency bottlenecks in predicting drug-target binding affinity (DTA), particularly for kinase inhibitor screening. This study proposes GTDDTA-a novel deep learning framework based on graph transformers and self-attention mechanisms-to address ...
Shiqian, Han, Jiahao, Shi, Jun, Wang
openaire +2 more sources

