Results 51 to 60 of about 9,543 (298)

Preliminary results of sediments eDNA metabarcoding along arctic fjord [PDF]

open access: yesARPHA Conference Abstracts, 2021
Ecosystems of arctic fjords are exposed to various natural and human-induced stressors that shape the taxonomic structure and functioning. Glacial activity and meltwater inflows together with advection of sea water masses from shelves form variety of environmental gradients that have been shown to influence marine biota.
Mikołaj Mazurkiewicz   +3 more
openaire   +2 more sources

Applications of next-generation sequencing technologies and computational tools in molecular evolution and aquatic animals conservation studies : a short review [PDF]

open access: yes, 2019
Aquatic ecosystems that form major biodiversity hotspots are critically threatened due to environmental and anthropogenic stressors. We believe that, in this genomic era, computational methods can be applied to promote aquatic biodiversity conservation ...
Afiqah-Aleng, Nor   +8 more
core   +1 more source

Merging DNA metabarcoding and ecological network analysis to understand and build resilient terrestrial ecosystems [PDF]

open access: yes, 2016
Summary 1. Significant advances in both mathematical and molecular approaches in ecology offer unprecedented opportunities to describe and understand ecosystem functioning.
Evans, Darren M.   +6 more
core   +3 more sources

Calibrating Environmental DNA Metabarcoding to Conventional Surveys for Measuring Fish Species Richness

open access: yesFrontiers in Ecology and Evolution, 2020
The ability to properly identify species present in a landscape is foundational to ecology and essential for natural resource management and conservation.
Mary E. McElroy   +19 more
doaj   +1 more source

Unlocking foraminiferal genetic diversity on estuarine mudflats with eDNA metabarcoding

open access: yesScience of The Total Environment, 2023
Environmental biomonitoring is a prerequisite for efficient evaluation and remediation of ecosystem degradation due to anthropogenic pressure or climate change. Estuaries are key habitats subject to multiple anthropogenic and natural stressors. Due to these multiple stressors, the detection of anthropogenic pressure is challenging.
Singer, David   +5 more
openaire   +3 more sources

Are we using eDNA metabarcoding to its full potential? [PDF]

open access: yesFish and Fisheries, 2021
Editorial.
Coscia, I, McDevitt, AD
openaire   +1 more source

Methods for the extraction, storage, amplification and sequencing of DNA from environmental samples [PDF]

open access: yes, 2018
Advances in the sequencing of DNA extracted from media such as soil and water offer huge opportunities for biodiversity monitoring and assessment, particularly where the collection or identification of whole organisms is impractical.
Banks, Jonathan C.   +17 more
core   +3 more sources

Aquatic eDNA sampling and plant metabarcoding (v0.0.1) v1 [PDF]

open access: yes, 2020
Aquatic eDNA sampling, extraction, and plant metabarcoding on Oxford Nanopore's Flongle platform. Sampling method adapted from: Laramie, M.B., Pilliod, D.S., Goldberg, C.S. and Strickler, K.M., 2015. Environmental DNA sampling protocol-filtering water to capture DNA from aquatic organisms (No. 2-A13). US Geological Survey.
Jordan Callahan, Robert Harbert
openaire   +1 more source

101 lakes - lentic fish community monitoring using eDNA metabarcoding [PDF]

open access: yesARPHA Conference Abstracts, 2021
We have recently developed and deployed methods for environmental DNA (eDNA) based monitoring of lake fish communities in the UK. This approach combines eDNA with modern High-Throughput-Sequencing technology, so-called eDNA metabarcoding. This non-invasive method has proven to be more effective at detecting elusive species than established invasive ...
Hänfling,Bernd   +3 more
openaire   +1 more source

Environmental DNA metabarcoding for fish community analysis in backwater lakes: A comparison of capture methods.

open access: yesPLoS ONE, 2019
The use of environmental DNA (eDNA) methods for community analysis has recently been developed. High-throughput parallel DNA sequencing (HTS), called eDNA metabarcoding, has been increasingly used in eDNA studies to examine multiple species.
Kazuya Fujii   +5 more
doaj   +1 more source

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